Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02208 ATGACCAACGCGCGTCCTCCACGCGCGGCCAAGAGGAAAGCCGCGGCTGCAATAAGCGAGCTGCTTCGCCCCGCCAGCAAGAAGCGCGTCGCGTTGGGAGACCTCACGAACGCCGCGGCCACGTCGGAAAAACCAGTTTCGCGGATTTTCAACCGGGAAGGGCGAAAACTCGAAAAGGCAAACGCAGCGCAACCGAGTGGGCCCTACGATTCCGACATTTACGAATACCTTCGCGCGTTGGAGGTGGCTCCTAGTACGCAACCGTTGGTGGATTATGTTGAGACGGTTCAGACGGTGGTGGATGCTGATGCGAGAGGTAATGTGGTGAATTGGTTGGTGAAAGTCGCAGAGGAATGCAAGTTCCTTCCCGACACGCTTCATTCTTGTATCGCTTACATCGACAGGTTTCTCTCGTTTAATGCATGTTCAAGACAGAGGTTGCCATTGCTTGGGATGGCAGCCATGCTTGTTGCAGTGAAATACGAAGAGGGTAGGAAACCTGTGGTTCAGAAGGTTTATTACATTGCGGGTAACACATACTCCAAGGAGGAGGTTGTGAACATGGAAGCTGATATATTGAAGTCATTGAAGTATGAATTGGGAAGTCCTACAGCGTTGACATTCTTAACGAGATTCTGCAAAGTTGGTCAAGAGGGTGTTGGTGCTTATAGTAAGTTTGAGTGCCTTAGCAACTACCTTGGTGAGCTGAGTTTGTTGGAGTATAGTTGTATAAAGTTCTTGCCATCTTTGGTGGCTGCATCTGCTGTGTTTCTAGCAAGATTCATGTTAAGCACAAAGAAAAATCCTTGGAATTCTACTCTCCATCAACTCACTAGATACACACCCAGTGACTTGAAGGAATGTGTTCTGATCATACATGACTTGTACCTTAGCAGGAGAGCCAAATCTTTGGCAGGAATAAGAGAGAAATACAAACAAGAGAAGTTCAAATGCGTGGCAACTACACCATCTCCTCGCAAGATACCTACCTCTGTCTTTCTATAG 1005 0.4796 MTNARPPRAAKRKAAAAISELLRPASKKRVALGDLTNAAATSEKPVSRIFNREGRKLEKANAAQPSGPYDSDIYEYLRALEVAPSTQPLVDYVETVQTVVDADARGNVVNWLVKVAEECKFLPDTLHSCIAYIDRFLSFNACSRQRLPLLGMAAMLVAVKYEEGRKPVVQKVYYIAGNTYSKEEVVNMEADILKSLKYELGSPTALTFLTRFCKVGQEGVGAYSKFECLSNYLGELSLLEYSCIKFLPSLVAASAVFLARFMLSTKKNPWNSTLHQLTRYTPSDLKECVLIIHDLYLSRRAKSLAGIREKYKQEKFKCVATTPSPRKIPTSVFL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02208 334 Gene3D - 89 195 - -
Spst8g02208 334 Gene3D - 196 329 - -
Spst8g02208 334 SMART Cyclin_C_2 203 325 IPR004367 -
Spst8g02208 334 SUPERFAMILY Cyclin-like 203 326 IPR036915 -
Spst8g02208 334 ProSitePatterns Cyclins signature. 105 136 IPR006671 -
Spst8g02208 334 SUPERFAMILY Cyclin-like 64 200 IPR036915 -
Spst8g02208 334 PIRSF Cyclin_A_B_D_E 2 332 IPR046965 GO:0016538|GO:0044772
Spst8g02208 334 SMART cyclin_7 207 294 IPR013763 -
Spst8g02208 334 SMART cyclin_7 110 194 IPR013763 -
Spst8g02208 334 Pfam Cyclin, C-terminal domain 203 324 IPR004367 -
Spst8g02208 334 FunFam Cyclin A1 190 321 - -
Spst8g02208 334 Pfam Cyclin, N-terminal domain 72 200 IPR006671 -
Spst8g02208 334 PANTHER CYCLINS 61 317 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02208 Spst-Chr8 31877676 31880324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02208 4 333 Core Cell Cycle Gene Families AT5G43080 50.432 3.55e-107 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02208 K06627 - gmx:100801988 385.956