Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst8g02174 | ATGGAAGACCAAGCGCGCGATGCACTACCACCTGGTTACCGGTTCTACCCGTCCGAGGAGGTGCTCCTCCGCTATTACTTAACCAAGAAAAACGAGAACCGGGAGGGGGGTTTCAAAGGTTCTGATTTGATCAAGGAACTGGACCTGTACGATCACGACCCCTTCGAATTACCAGAAGTTGCGTGCTTTCCGTATGGTTACGGAGGGAGGAAGAAACATTGGTTCTGTTACACCGTTAAAGAGACCAAACGCGGAAGCAGAAAGGTTAAAAGCGGGTTCTGGCTGCGGAAGGGAAGGATTCGGGATATTCGCGATAACGGTGGGATTGGGAACGCTGTTTTGGGCACGAGGTCGCGTTTCGTTTTCTATGTCGGGAATTCGCTGAAAAACGCTACCAAAACGGATTGGATTTTGTACGAGTATGCATTGGTTGACCAAATTCTGGCGTCGTTCGTGCTTTGTCGTGTGGTGAATAAGCCTCATCATAAGAATAGTCCATCAGAGATTGGTCTCAGTTGTTGTGCTGAAGAGAGTGCCGCGGTGGCTGTGCGTCACGTTGGTGTTCAGCATGATGGATGTATCGGAGGTGATGTTGAAGGTAAGGTGTGTGATGATGGTTTTGTTAATAGAGAGGCTGAGGCTGCTGAGAATCCAATTAGGTGTGGTGGTGAACATGATGATAATGCTGCACCTGTTTCAGTTGCTCAGGGAAGTCAGCCGATTCATGAAAGGCCTTCTGGACTTCCCTGTGGCAGTTCATTGTTCGTTGAAGCTGTGACATCTCAGCAACAACTGCTGTCCATTCTAGAGGAAGATTTCATAGAATTGAATGATATTGCATGA | 843 | 0.4816 | MEDQARDALPPGYRFYPSEEVLLRYYLTKKNENREGGFKGSDLIKELDLYDHDPFELPEVACFPYGYGGRKKHWFCYTVKETKRGSRKVKSGFWLRKGRIRDIRDNGGIGNAVLGTRSRFVFYVGNSLKNATKTDWILYEYALVDQILASFVLCRVVNKPHHKNSPSEIGLSCCAEESAAVAVRHVGVQHDGCIGGDVEGKVCDDGFVNREAEAAENPIRCGGEHDDNAAPVSVAQGSQPIHERPSGLPCGSSLFVEAVTSQQQLLSILEEDFIELNDIA | 280 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst8g02174 | 280 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 82-RELATED | 9 | 168 | - | - | |
Spst8g02174 | 280 | Pfam | No apical meristem (NAM) protein | 10 | 143 | IPR003441 | GO:0003677|GO:0006355 | |
Spst8g02174 | 280 | Gene3D | NAC domain | 18 | 164 | IPR036093 | GO:0003677|GO:0006355 | |
Spst8g02174 | 280 | ProSiteProfiles | NAC domain profile. | 9 | 159 | IPR003441 | GO:0003677|GO:0006355 | |
Spst8g02174 | 280 | SUPERFAMILY | NAC domain | 7 | 159 | IPR036093 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst8g02174 | Spst-Chr8 | 31145014 | 31147260 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst8g02174 | 9 | 204 | NAC Transcription Factor Family | AT1G32510 | 32.075 | 1.16e-25 | 100 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Spst8g02174 | NAM | 1.4e-21 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst8g02174 | - | - | gmx:100785871 | 437.187 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst8g02174 | 8 | 31145014 | 31147260 | Spst8g02174 | 8 | 31145014 | 31147260 | ECH |