Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02169 ATGGCCTGCAGACAAATTCAACGCAGCTCTTCATCACGAACGAAGAATTTTGACGTGTTTGTTAGCTTTAGAGGTGAAGATACTCGTAACGGTTTTACTGATCACCTTTTTGCTGCTCTTCGGAGAAAAGATGTTCTGGCCTTCAGAGACGACCAAACAATAAAAAAAGGGGAATTCTTGGAGTCTGAGCTCTTGCGCGCAATTGAAGGGTCACGAGTTTTCATTGTTGTCTTCTCGAAGGACTATGCATCATCCACATGGTGCATGAAAGAGCTTACGAAGATCGTGGAAACAGGTCGAAGTTTGCTCCCTATCTTCTATGATGTCACTCCTTCTGAGGTCCGAAAACAGAGTGGAGAGTTTGCAGAAGCTTTTGCTCAACACGAAGAAAGGTTCAAAGATGACTTGGAAATGCTACAAAAATGGAGGGAAGCGCTCAAAACAAGTGCCGATCGTTGTGGGTGGGATATACAAAATAAGCAACAAAATGAAGAAATCGAAAACATTGTTGAAGAGGTAATCAACATATTGGGTTATAATCAAATTTTGAGTTTTGGAGATGATTTTGTTGATATGCATTCTCGTGTTAAACAAATGGAAGAACTTCTGGATTTGGGTGCAAATGATGTTGTTGGGCTTGTGGGAATTTTGAAGAAACTTCTAGACTATCGAGAATTTCATCCTGACATTGGTATGAAAGTTCTGATTGAGAAATCACTTATTAGTTGTCGAGATCGGAAGATTCAAATGCATGACTTGTTGCAAGAGTTGGGGAAGAGTATTGTCAGAGAAGAAGCACCCAAGGAACCAAGAAAGTGGAGCAGGTTATGGGACTACAAGGATCTCCAAAAAGCCATGAAAATAAATACGGAAGCCAAAAATCTTGCAGCTATAGTTATTGAACAACGTCCAGAAGAGTTTCTACAAGAAAGAATAAGAGTGGATGCTCTGTCAAAAATTAATCACCTTGAATTGCTCATACTTCAGAATGTGAACACTTTTGGATCTCTGAATTGTATTTCTAATGAACTGAGGTATCTGAATTGGGATAACTTTCCTTTCGTGTCTTTGCCATCAACTTTCGAGCCAGATCAACTTGTAGAATTGCAACTGCGTTATAGCAATATCAAGAAATTATGGGAAGGCACAAAGATCCTGCCTAAGTTGAGAACTCTGGATCTCAGTCACTCCAAAAATCTTATTGAGATGCCAGACTTAACAGGGGTTCCTCATCTTACGACTCTTCGACTTGAAGGATGTATAGAACTTGTCCAGATAGATCCATCCATTGGTATTCTAAGAGAACTTGTTTACTTGCAACGAACTATTTCCTCTGCTAAGACGGAAATTGTTATTCCTGGGACTCAAATTCCGGAGTGGTTTAATAAACAAAATGCTCGTAGTTCAATAAGTGTGGATCTATCATCTGTTATGGATGATCCAAATTGGATAGGTGTTGCCTTTTGTGTACTATTTGTCACACACCAAGATCCTACGAATTTGAGTGAAAGAAGGAATGGTCATCGTGATTGTATTGCATACGGTGTCCATAATAAACACCTTTTTCGAAAAGGTTATTTATTTGTTCCAATACATTTCAAGGAAGATCTGGTGGCAGTTGAATTAGATCACTTGTTTACAGTGTTTTACTCTCGGGAAGAATTCATCGGTCTTCTTACTCAAGATCCAGACAAAATGCTTGATCCTGCTAAATTGGAATTCGAAATTATTTCTAATAATAGTCAAGGTTTACGTATTGTTGTGAAGAATTGCGGATATCGTTGGGTATTTAAGGAGGATCTTCAACAATTACACTTGATGTTTGGCAGAAATTCTTCATCTCAGAAGAGTAAACATCTAAGGAGTGATTGA 1872 0.3868 MACRQIQRSSSSRTKNFDVFVSFRGEDTRNGFTDHLFAALRRKDVLAFRDDQTIKKGEFLESELLRAIEGSRVFIVVFSKDYASSTWCMKELTKIVETGRSLLPIFYDVTPSEVRKQSGEFAEAFAQHEERFKDDLEMLQKWREALKTSADRCGWDIQNKQQNEEIENIVEEVINILGYNQILSFGDDFVDMHSRVKQMEELLDLGANDVVGLVGILKKLLDYREFHPDIGMKVLIEKSLISCRDRKIQMHDLLQELGKSIVREEAPKEPRKWSRLWDYKDLQKAMKINTEAKNLAAIVIEQRPEEFLQERIRVDALSKINHLELLILQNVNTFGSLNCISNELRYLNWDNFPFVSLPSTFEPDQLVELQLRYSNIKKLWEGTKILPKLRTLDLSHSKNLIEMPDLTGVPHLTTLRLEGCIELVQIDPSIGILRELVYLQRTISSAKTEIVIPGTQIPEWFNKQNARSSISVDLSSVMDDPNWIGVAFCVLFVTHQDPTNLSERRNGHRDCIAYGVHNKHLFRKGYLFVPIHFKEDLVAVELDHLFTVFYSREEFIGLLTQDPDKMLDPAKLEFEIISNNSQGLRIVVKNCGYRWVFKEDLQQLHLMFGRNSSSQKSKHLRSD 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02169 623 ProSiteProfiles TIR domain profile. 15 177 IPR000157 GO:0007165
Spst8g02169 623 SUPERFAMILY L domain-like 312 439 - -
Spst8g02169 623 Gene3D Ribonuclease Inhibitor 306 463 IPR032675 -
Spst8g02169 623 Pfam TIR domain 16 173 IPR000157 GO:0007165
Spst8g02169 623 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 155 IPR035897 -
Spst8g02169 623 Gene3D - 10 183 IPR035897 -
Spst8g02169 623 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 178 - -
Spst8g02169 623 Pfam Leucine Rich Repeat 365 384 IPR011713 -
Spst8g02169 623 Pfam C-JID domain 452 601 IPR045344 -
Spst8g02169 623 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 216 IPR044974 GO:0006952
Spst8g02169 623 SMART till_3 16 152 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02169 Spst-Chr8 31066644 31070432 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02169 214 483 WRKY Transcription Factor Family AT5G45050 31.507 6.11e-31 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02169 - - vra:106780706 342.043