Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02145 ATGGCTGCAAGGACTGAACACCAAACGGTTCCTCTTTCGGTACTCCTGAGGCGTGAATTGGCTCATGAGAAAATTGAGAAGCCTGAGATTGCTCATGGTCAAGCGTGCCAAAGCAAGAAAGGGGAGGATTTAACACTGGTCAAGACAGAATGCCAGAGGGTGGTGGGGGATGGGGTCTCTATATACTCAGTTTTTGGGCTGTTTGATGGACACAATGGAACTGCTGCTGCGATTTATACCAAGGAGAATCTTCTAAATAATGTTTTAAGTGCGATTCCTCCAGATCTTAACAGAGATGAGTGGCTAGCAGCATTGCCCAGGGCTTTAGTTGCTGGCTTTGTAAAAACTGATAAAGATTTTCAAGTGAAAGGGCAAAAATCTGGAACAACTGTCACCTTTGTGATTATAGAAGGTTGGGTTGTAACAGTTGCATCAGTTGGTGATTCCCGTTGCGTACTTGAATCTTCTGATGGTGAGATTTATTACTTGTCTGCAGATCACAGGCTTGAATCGAATGAAGAGGAGAGGGTGCGGATCACCTCTAGTGGTGGTGAAGTTGGTCGATTAAATACAGGGGGAGGTGCAGAG 588 0.4524 MAARTEHQTVPLSVLLRRELAHEKIEKPEIAHGQACQSKKGEDLTLVKTECQRVVGDGVSIYSVFGLFDGHNGTAAAIYTKENLLNNVLSAIPPDLNRDEWLAALPRALVAGFVKTDKDFQVKGQKSGTTVTFVIIEGWVVTVASVGDSRCVLESSDGEIYYLSADHRLESNEEERVRITSSGGEVGRLNTGGGAE 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02145 196 SUPERFAMILY PP2C-like 38 186 IPR036457 -
Spst8g02145 196 PANTHER PROTEIN PHOSPHATASE 2C 32 190 IPR015655 GO:0004722|GO:0006470
Spst8g02145 196 CDD PP2Cc 62 190 IPR001932 -
Spst8g02145 196 Gene3D - 30 194 IPR036457 -
Spst8g02145 196 ProSiteProfiles PPM-type phosphatase domain profile. 24 196 IPR001932 -
Spst8g02145 196 SMART PP2C_4 26 195 IPR001932 -
Spst8g02145 196 Pfam Protein phosphatase 2C 62 188 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02145 Spst-Chr8 30407929 30410370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02145 1 196 PP2C-type Phosphatase Gene Family AT1G47380 79.082 2.15e-113 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02145 - - gmx:100816201 373.629