Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02116 ATGGCTACTCGTCTAGATATCAAAGGTGCAAACTTGCTGGTCAATGAATCAGGCATTGTGAAACTTGCAGATTTTGGGCTGGCGAAAATTCTGATGGGGAATTCATATGATCTTTCTTTAAAGGGTAGTCCTTACTGGATGGCTCCAGAGGTCGTGAATGGTGCCATAAAGAACAAATCTAATCCTGATGTTGCCATGGGCATTGATATATGGAGCTTAGGGTGCACCATTATAGAAATGTTAACTGGGAAACCTCCTTGGAGTGAACGTGAAGGGCCTTCGGCCATGTTCAAGGTACTGCAAGAGTCCCCGCCTATACCAGAAACTTTATCGTCAGTGGGAAAGGACTTCCTCCAAAAATGTTTCCAAAGGGACCCTGCAGATCGACCATCTTCATCAGCTCTTCTTAAGCATGCCTTTGTGCAGAATTTGCATGATCAGGATGTTCTAGGTCATCCACAATCCTATCCTAGAGGAGACTTTGGACAAGGAGTAAGTGCTAATCTATTTCATGAACCATGCGGATCATTGATATGTCCAAGGATGCAAGGAGCTTGGGTGCTCGGGACCTTGGGTGCCTGGGTGCTAAGGACCTTGGGTGCCCGAGTGTTTCGCAAGTTGGCAAGTCGGCTAGTTGGGAGCTTAGGATATTTTGAACCTCGGGAAGTTTTGAAGCTAGGCAAGTCGGGAGCTTGTCCTAGAGATACCACCACGAATAGAAGTGGCATAATGCAAGCCACCATGAGCTCACGGTGTCTTAACAAAATTCAGAAATTAGTCGGCGATACTTCCGAACAAAGCAGAGCTAAGGAGTCTAATCATATTATAGCTTACAGTCACTCTCATGTGCCAGAAGTGAACATTCTTCAATCTGCATTGAAACCTGGTACCCTCAATTACATGTCTGTTGAAAATTCCAGAAACATTTCCACCATGATGAGAATGATCACTAACTTCTGA 960 0.449 MATRLDIKGANLLVNESGIVKLADFGLAKILMGNSYDLSLKGSPYWMAPEVVNGAIKNKSNPDVAMGIDIWSLGCTIIEMLTGKPPWSEREGPSAMFKVLQESPPIPETLSSVGKDFLQKCFQRDPADRPSSSALLKHAFVQNLHDQDVLGHPQSYPRGDFGQGVSANLFHEPCGSLICPRMQGAWVLGTLGAWVLRTLGARVFRKLASRLVGSLGYFEPREVLKLGKSGACPRDTTTNRSGIMQATMSSRCLNKIQKLVGDTSEQSRAKESNHIIAYSHSHVPEVNILQSALKPGTLNYMSVENSRNISTMMRMITNF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02116 319 SUPERFAMILY Protein kinase-like (PK-like) 6 161 IPR011009 -
Spst8g02116 319 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02116 319 Pfam Protein kinase domain 6 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02116 319 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 6 153 - -
Spst8g02116 319 SMART serkin_6 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02116 319 Gene3D Transferase(Phosphotransferase) domain 1 5 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02116 Spst-Chr8 29838400 29846597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02116 6 143 MAP Kinase Kinase Kinase AT5G66850 68.116 9.19e-64 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst8g02116 Pkinase 8.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02116 - - gmx:100819530 351.288