Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02109 ATGGATGAACTAAACTGTAGCATTGTGGTTATGACTGGGTCGCAGGCAAAAATCCTCAGGCTTAACTTAGGGTGCTCCGATGAACTCCAAACTCCCTTTTTCTCGGCTACTGCTTCACCAGGTATAGAAATTGCAAAAGTAAAAGGCAGAAGATTGAAGCATTCTACCCCAGTGGGTAGCCCTGAAGAAGCAGGTACTTCTGTTACAAGAAACATAGGAGTAAATTTTGGGTCAAGTTCAGACTCGACGACGTCTCCTTTCCTAGTCTATGAACAAAATCCTCTGTACGAGAGTCAGGGCGGCCCAGAGCAAAACATACGCAAAGCAATCAACGAACCAAAAGATTTCAATTTCCAGCCACCATCATGCTTTGATCTTGAAAGAGATCGCCCTCCCCCTTCGTGGCCACGTCCAGCACCATCTGTGGCTAGTGATAACAAGACTGTATTTTGGATTCCGCAAAACCACATTGTAGACAACAAGTTTCAGAAAGCTAAAAATAATATCCGAAGAACTAAATCTCCAACTTCGAAAACTTTACTTGAGAATTTTATACGTTGTGATCAAGAGATGAGAGCAAATGAACTTGGGTTTGGCCAAGGGCAAAGTAGAAGTTATGTCCCCGACTCGGACAATAACGATAATTCCATTCCTTTGGGCAGAACTACGTCAATACCTCCTCCTTTATGCTCACAGTGTCAGAATAAAGCACCAGTATTTGGAAAGCCTCCAAAACGGTTTTCTTATGAAGAGCTAGAGGAAGCTACTGATATATTCTCAGATGAGAACTTTTTGGCTGAAGGTGGATTTGGTGTGGTTCACAAGGGAATACTGAAAGATGGCCAGGTTGTTGCGGTGAAACAGTTGAAGTTTGGGGGTTCTCAAGTAGATCTTGATTTCTGCCGGGAAGTTCGGGTTTTGAGCTGTGCACAACACAGAAACGTTGTACTGTTAATAGGATTTTGTACAGAGAGCAATTTCAGGATATTAGTTTACGAGTACATATGCAACGGATCCTTAGACCTCTACTTATATGGAGATGAGAATATGCCTTTCGATTGGATCTCACGCTTAAAGATTGCAATTGGAACTGCACGGGGCTTGCGCTACCTTCATGAAGATTGTAGAGTTGGTTGTATAGTGCACAGAGACCTTCGACCCAAAAATATCCTCTTAACCCATGACTTTGATCCTCTGGTGGCAGATTTTGGGCTTGCTAGATGGCACTCAGAATGTAATATAGATACAGAAGATCGGGTTATAGAAACTTCAGGGTATCTTGCACCGGAGTATCTTGACTCTGGAAACCTTACATATAAAGTAGATGTATATGCATTTGGAATTGTATTATTAGAGTTAATAACTGGTAGAAGAATTAGCGAGTTGGAACAGTTCAATGGAATGTCGTATCTTTCCCAATGGTTTCACCCTTTACGCATGTTAGAGCCCAGTCATATTTTACAAAATGTTCGATCTCTCAAACCATGCTTCAACTCTGAGGAATCATTGGAATTTAATCTTCAATTACAAGCCATGGCACGAGCTGCTTCGTTGTGTCTTCGTGTGGATCCTGATGCCAGACCCCCAATGTCAAAGATCCTGAGAGTTCTGGAAGGGGGTGATCCAGTTCGTCCTATTGGTTTAGACATCAATTCAGTTGGTAACACAAGTGGCCATTTAAGTGGCTTGAAGTCGCTCACTCCACCAAAAGGTACCATAAGTCATTCTCGTAGACTATCACATTGA 1746 0.4233 MDELNCSIVVMTGSQAKILRLNLGCSDELQTPFFSATASPGIEIAKVKGRRLKHSTPVGSPEEAGTSVTRNIGVNFGSSSDSTTSPFLVYEQNPLYESQGGPEQNIRKAINEPKDFNFQPPSCFDLERDRPPPSWPRPAPSVASDNKTVFWIPQNHIVDNKFQKAKNNIRRTKSPTSKTLLENFIRCDQEMRANELGFGQGQSRSYVPDSDNNDNSIPLGRTTSIPPPLCSQCQNKAPVFGKPPKRFSYEELEEATDIFSDENFLAEGGFGVVHKGILKDGQVVAVKQLKFGGSQVDLDFCREVRVLSCAQHRNVVLLIGFCTESNFRILVYEYICNGSLDLYLYGDENMPFDWISRLKIAIGTARGLRYLHEDCRVGCIVHRDLRPKNILLTHDFDPLVADFGLARWHSECNIDTEDRVIETSGYLAPEYLDSGNLTYKVDVYAFGIVLLELITGRRISELEQFNGMSYLSQWFHPLRMLEPSHILQNVRSLKPCFNSEESLEFNLQLQAMARAASLCLRVDPDARPPMSKILRVLEGGDPVRPIGLDINSVGNTSGHLSGLKSLTPPKGTISHSRRLSH 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02109 581 MobiDBLite consensus disorder prediction 199 221 - -
Spst8g02109 581 FunFam Os07g0541700 protein 335 423 - -
Spst8g02109 581 Gene3D Phosphorylase Kinase; domain 1 228 334 - -
Spst8g02109 581 MobiDBLite consensus disorder prediction 112 142 - -
Spst8g02109 581 SMART tyrkin_6 259 537 IPR020635 GO:0004713|GO:0006468
Spst8g02109 581 SUPERFAMILY Protein kinase-like (PK-like) 237 538 IPR011009 -
Spst8g02109 581 PANTHER OS01G0750732 PROTEIN 163 539 - -
Spst8g02109 581 ProSitePatterns Tyrosine protein kinases specific active-site signature. 380 392 IPR008266 GO:0004672|GO:0006468
Spst8g02109 581 Gene3D Transferase(Phosphotransferase) domain 1 335 542 - -
Spst8g02109 581 MobiDBLite consensus disorder prediction 559 581 - -
Spst8g02109 581 ProSiteProfiles Protein kinase domain profile. 259 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02109 581 Pfam Protein tyrosine and serine/threonine kinase 263 500 IPR001245 GO:0004672|GO:0006468
Spst8g02109 581 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 231 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02109 Spst-Chr8 29459136 29461351 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02109 179 533 Trihelix Transcription Factor Family AT1G68690 42.582 6.51e-77 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Spst8g02109 PK_Tyr_Ser-Thr 6.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02109 - - pvu:PHAVU_001G018000g 1030.39