Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02107 ATGCAAACTTTACTGTCACCTTTGCCCGAGCCAGACCTCTCCTTGAACATAAGTCCTCCCTCTATTTCAGATATTTCTGAGGCCAAGGAAGTGGGAGGCTTAGGCAAAGTCATTTACAACGACATGTGTTCAACTTCTGATTCGGGGAGCAGTGGAGGAAGTGATTTGAGCCATGAGTTCCACAACCTTCGTCACCATCGCGAGCCCACATTGAAGTTAGGCTTTGGAACCGTGGATTTGAATCCGCACCATCAGGTTCAAGGTGACACAAGAAGCTTCAACCACCACCACCACCATCACCTTCAACCTCACATCTATGGCCGCGATTTCAAACGAAGTGCAAGAGTCGTCAATGGTGTCAAAAGAAGCGTCAGGGCTCCTAGGATGAGATGGACCACCACCCTCCATGCCCATTTTGTTCACGCGGTTCAACTTCTTGGCGGCCACGAAAGAGCAACTCCGAAGTCTGTGTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTGCAGACAGAACAAAAGAAAGGGAAAAAAGGACTTTTGTTAGTCGTTATAGGTTTGCCTCTAGTAGTGGGGGAGATGTATAGAACAGTGAAGAGCACTGACAAAGGCAGCACAGGTCATGGGCAGACAGATATTGGAGTATTGAATCCAAGGCCAGGGATTAACATTGTTCATCTGCATGCACCCTCACCCAATTTACCAGACCCGATTCAAAGTTCCCACAGGACAGCGTGGCAATCATCAATAGAGACAAAGCCAAACGATAGTAGACAAGAAGGAGAGCTCAAGGGGAGTGAAAGCATGGTGAATGGGCAGAATTATGTTGGAGGGTTGGATTCTACCACTTTGTCACGTTCTGAGGGGATGCTTGACCTTGAATTCACCCTTGGAAGACCCAATTGGCAAAAAGACCACCCAGAATCATCAAGAGAGTTAACTCTTTTAAAGTGTTGA 975 0.4687 MQTLLSPLPEPDLSLNISPPSISDISEAKEVGGLGKVIYNDMCSTSDSGSSGGSDLSHEFHNLRHHREPTLKLGFGTVDLNPHHQVQGDTRSFNHHHHHHLQPHIYGRDFKRSARVVNGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQTEQKKGKKGLLLVVIGLPLVVGEMYRTVKSTDKGSTGHGQTDIGVLNPRPGINIVHLHAPSPNLPDPIQSSHRTAWQSSIETKPNDSRQEGELKGSESMVNGQNYVGGLDSTTLSRSEGMLDLEFTLGRPNWQKDHPESSRELTLLKC 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02107 324 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 11 312 IPR044847 GO:0000976|GO:0006355|GO:0010158
Spst8g02107 324 FunFam Myb family transcription factor 125 183 - -
Spst8g02107 324 MobiDBLite consensus disorder prediction 240 260 - -
Spst8g02107 324 SUPERFAMILY Homeodomain-like 124 177 IPR009057 -
Spst8g02107 324 MobiDBLite consensus disorder prediction 270 287 - -
Spst8g02107 324 Gene3D - 126 182 - -
Spst8g02107 324 NCBIfam myb-like DNA-binding domain, SHAQKYF class 127 177 IPR006447 GO:0003677
Spst8g02107 324 MobiDBLite consensus disorder prediction 238 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02107 Spst-Chr8 29421085 29424004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02107 93 218 G2-like Transcription Factor Family AT5G42630 64.341 9.14e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst8g02107 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02107 - - vra:106764099 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02107 8 29421085 29424004 Spst8g02107 8 29421085 29424004 ECH
Spst8g02107 8 29421085 29424004 Spst9g00422 9 3763704 3766869 PCT