Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02100 ATGGCCCTCACGGACCTCTTCTCGAGCGAGATCGCCTCCGATCTCTGGAAAATGCTCGTAACAATTTCCAAGAAGACTCTCCGCTGCAAGTCCAGCGCGGAGCAACTCATCACCTACGTGCGCGAGATTCTTCCCATGATCGAGGAAATCAAATACTCCGGCGTGGAGCTTCCGGCGCCGCGGCAGTCGCAGCTGGACCGCCTCTCGGAGATTCTGCGCTCCGGCGTGGAGCTCTCGCACCAGGTGCTCTCCTCCAGCCGCTGGAACGTGTACCGCAACTTCCAGCTGGCGAAGAAGATGGAGAAGCTAGAGAAGCACGTCACGCGGTTCCTGCAGGTTCCCATGCAGGCGCACATACTCGCGGACGTGCACCACGCGCGGTTCGAGATGGCGGAGCGGTTCGACCGGGTGGAGGCGTCGAACCGGCGGATGGAGCGGTTTCTCGAGGAGATGAAGATAGGGGTGAACGGGGGCGGGTGGGTGGAGGAGGCTGTGAGGAGCATGCAGGAGGATGAGACGTGGGTGGAAGGGTGTAAAGGGAATAACGGTTTCGGGGTTGGGTTGGACTTCGGGAAGAACAAGGTTATGGAGATGGTTTTCTCGAGGAGTGATGATGATTGGATTGTCGGGATTTGCGGGATTGGTGGCTCCGGGAAAACCACCCTTGCCAGAGAGCTCTGCAGAGATGACCAAGTCAGATGTTATTTCAAGGACAGGATTTTGTTTTTGACTGTGTCACAGTCTCCGAATGTGGAGCAGCTGAGAGCGAGGATTTGGGGACACATCATGGGCAACCAAGACTTGAATGGCAATTACATGGTTCCACAATGGATGCCACAGTTTGAGTGCAAAGGGGAAGCTCAGGTTCTTGTTGTTCTTGATGATGTGTGGTCCCTCTCTGTGCTGGAGCAGCTTGTGTGGAAAATTCCTGGCTGCAAATTCCTTGTGGTGTCTCGATTCAATTTCCAAACAGTTTTTAGTGCCACTTATCACGTAGAATTGCTGGGTGAAGAGGATGCCCTCTCTTTATTTTGTCACCATGCTTTTGGACAGAAGTCAATTCCTTTGGGCGCTAATGTGAATTTGGTCAAGCAGGTTGCGGCTGAGTGTGGAAGGCTTCCACTGGCTCTAAAGGTGATTGGAGCTTCTTTGCGGAATCAGAATGAAATGTTTTGGTTGAGTGTTAAAAGTAAGCTGTCTAAAGGTCACAGCATTGGTGAATCCTATGAAATCAATCTGATTGATAGAATGGCAATTAGTACTAAATACCTGCCAGAAAAGATCAAGGAGTGCTTCTTGGATCTGTGCACTTTTCCTGAGGATAGAAAGATCCCTCTAGAAGTTCTAATCAATATGTGGGTTGAAATCCATGACATTCCTGAGGCGGAAGCATATGCCATTGCGGTTGAGCTTTCGAACAAGAACCTTCTCACCTTAGTGAAAGAGGCACGTGCTGGGGGCATGTATAGCAGTTGCTTTGAGATTTCTATAACTCAACATGATATACTGAGAGACCTTGCTCTTATTTTGAGCAACCGCGGGAGCATTCATGAACACAGAAGATTAGTTATGGCACAACGAGAAGAAAATGGACTACTCCCCAAAGAGTGGTCAAGATACCAGGACCGACCGTTTGAAGCTCAGATTGTTTCAATCAACACAGGTGAAATGACAGAAATGGACTGGTTTGAATTGGATTTTCCCAAGGCTGAAGTGTTGATTATCAATTTCACATCCAGTGATTACTTTTTACCTCCCTTCATCAATAAGATGCCAAATTTGAGGGCATTGATAATAATAAACTACAGTACCTCATATGCCCGCCTTCACAATATTTCAGTTCTTAAGAATTTGACCAACTTAAGGAGTCTCTGGCTTGAAAAGGTTTCTACCCCTCAGTTGTCAGGCACTGTCTTGCAAAACTTGGGTAAACTATTTATAGTCCTATGCAAGATTAACAATAGTTTGGATGGGAAACAGTTCCCTAACCTCTCTGAGCTCACTCTTGATCACTGTGCCGATCTAACGCACTTGCCCTCAAGCATTTGTGGAATAAAGTCACTCCAAAACTTGAGCCTCACCAACTGCCACAATTTGTCTCAACTACCTGTTGAATTTGGCAAACTAAAATCTCTAGAGATCCTCCGTTTATATGCTTGTCCAGATCTAGAAACACTTCCTCCTAGCATGTGTGACATGAAGAGATTGAAGTATATTGATATTTCTCAGTGTGTTAACTTGACATGCTTCCCTAAAGAGATTGGTAGATTAGTAAGTTTAGAGAAGATTGACATGAGGGAATGCCCCATGATTAGGTATTTACCGAAGTCTGCAGTGTCATTACAATCTCTGCAGCTTGTAATTTGTGATGAGGAGGTATATGGTACATGGAGAGATGTTGTTGAGATGACCAAGTCAAATGTCCATATTCAAGTACCAGAACAACACTTTGATCTGGACTGGCTTCAAGAGTGA 2475 0.4675 MALTDLFSSEIASDLWKMLVTISKKTLRCKSSAEQLITYVREILPMIEEIKYSGVELPAPRQSQLDRLSEILRSGVELSHQVLSSSRWNVYRNFQLAKKMEKLEKHVTRFLQVPMQAHILADVHHARFEMAERFDRVEASNRRMERFLEEMKIGVNGGGWVEEAVRSMQEDETWVEGCKGNNGFGVGLDFGKNKVMEMVFSRSDDDWIVGICGIGGSGKTTLARELCRDDQVRCYFKDRILFLTVSQSPNVEQLRARIWGHIMGNQDLNGNYMVPQWMPQFECKGEAQVLVVLDDVWSLSVLEQLVWKIPGCKFLVVSRFNFQTVFSATYHVELLGEEDALSLFCHHAFGQKSIPLGANVNLVKQVAAECGRLPLALKVIGASLRNQNEMFWLSVKSKLSKGHSIGESYEINLIDRMAISTKYLPEKIKECFLDLCTFPEDRKIPLEVLINMWVEIHDIPEAEAYAIAVELSNKNLLTLVKEARAGGMYSSCFEISITQHDILRDLALILSNRGSIHEHRRLVMAQREENGLLPKEWSRYQDRPFEAQIVSINTGEMTEMDWFELDFPKAEVLIINFTSSDYFLPPFINKMPNLRALIIINYSTSYARLHNISVLKNLTNLRSLWLEKVSTPQLSGTVLQNLGKLFIVLCKINNSLDGKQFPNLSELTLDHCADLTHLPSSICGIKSLQNLSLTNCHNLSQLPVEFGKLKSLEILRLYACPDLETLPPSMCDMKRLKYIDISQCVNLTCFPKEIGRLVSLEKIDMRECPMIRYLPKSAVSLQSLQLVICDEEVYGTWRDVVEMTKSNVHIQVPEQHFDLDWLQE 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02100 824 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 13 133 IPR008808 -
Spst8g02100 824 SUPERFAMILY RNI-like 567 787 - -
Spst8g02100 824 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 3 822 IPR039203 GO:0050832
Spst8g02100 824 Gene3D - 334 413 IPR042197 -
Spst8g02100 824 PRINTS Disease resistance protein signature 731 747 - -
Spst8g02100 824 PRINTS Disease resistance protein signature 283 297 - -
Spst8g02100 824 PRINTS Disease resistance protein signature 370 384 - -
Spst8g02100 824 PRINTS Disease resistance protein signature 208 223 - -
Spst8g02100 824 Gene3D - 415 506 IPR036388 -
Spst8g02100 824 Gene3D - 178 328 IPR027417 -
Spst8g02100 824 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Spst8g02100 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 435 IPR027417 -
Spst8g02100 824 Gene3D Ribonuclease Inhibitor 537 807 IPR032675 -
Spst8g02100 824 Pfam NB-ARC domain 193 414 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02100 Spst-Chr8 29270898 29274404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02100 662 763 WRKY Transcription Factor Family AT4G12020 35.294 3.97e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02100 - - gmx:100816326 1466.06