Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02087 ATGAACTGCTTTTGTACTGGTCTTCGGGGGAAGAATGAGGCCGCCGAGATAACTTTAGGGTCAAACTCAAAGGCAAAGCCCAAGAAACCGTCGGCGACTAGTTTCAGTTTTCGCGAGCTTGCATCGGCAGCGAGGGGTTTCAAGGAAGTGAATTTGATTGGGGAAGGAGGTTTTGGAAAGGTGTACAAGGGTCGTCTCTCTACAGGGCAGCTTGTGGCTATAAAACAATTACGTCTCGATGGAGAAACTCATCAGGGTAATCGGGAATTTGTCACCGAGGTTCTTATGTTGAGCCTCCTACACCATTCTAATCTTGTTAAGCTATGTGGCTACTGCACCCACGGAGATCAAAGGCTTTTGGTTTATGAATACATGCCTATGGGAAGCCTCGAACAACTTCTTGAAGAGAAAAAACCACTGAGTTGGAAAACGCGACTGAAGATTGCGGTGGGGGCTGCCCGGGGCCTCCAGTATCTCCACTGTTCAGCCAATCCACCGGTTATCTATCGGGACTTGAAATCTGCCAACATCTTGCTAGACAACAATTTACACCCAAAACTCTCTGATTTTGGACTTGCGAAGCTAGGACCTGTCGGAGACAACACCCATGTCTCCACCAGAGTCATGGGAACGTATGGCTACTGTGCCCCCGAGTATGCCATGAGTGGCAAATTAACCATTAAATCTGATATCTACAGCTTCGGCGTCGTCTTGCTCGAGTTGATCACCGGACGCAAGGCAATGGATGTCACCAGGAAACAACGGGAGCAAAGCTTAGTTGCATGGTCTAGGCCATATATGAGTGACCGGAGAAAGGTTTCGCTGATTGTTGACCCTCTGTTGGAAGGAAACTACCCTTTACGATGTTTGCACAATGCAATTGCGATCACTGCAATGTGCCTCCAGGATCAACCCAATCTTCGTCCGTCCATTGGTGACATTGTTGTTGCATTGGAGTATCTGGCCTCTGAAGGTGTTTCCGACGTCAGCAGGCAGCCACCACGCCAATCACACTCCCAATCAGACACAGACTAG 1035 0.4879 MNCFCTGLRGKNEAAEITLGSNSKAKPKKPSATSFSFRELASAARGFKEVNLIGEGGFGKVYKGRLSTGQLVAIKQLRLDGETHQGNREFVTEVLMLSLLHHSNLVKLCGYCTHGDQRLLVYEYMPMGSLEQLLEEKKPLSWKTRLKIAVGAARGLQYLHCSANPPVIYRDLKSANILLDNNLHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTIKSDIYSFGVVLLELITGRKAMDVTRKQREQSLVAWSRPYMSDRRKVSLIVDPLLEGNYPLRCLHNAIAITAMCLQDQPNLRPSIGDIVVALEYLASEGVSDVSRQPPRQSHSQSDTD 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02087 344 SUPERFAMILY Protein kinase-like (PK-like) 28 319 IPR011009 -
Spst8g02087 344 CDD STKc_IRAK 53 319 - -
Spst8g02087 344 PIRSF ILK 18 331 - -
Spst8g02087 344 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Spst8g02087 344 FunFam Serine/threonine-protein kinase CDL1-like 19 124 - -
Spst8g02087 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Spst8g02087 344 ProSiteProfiles Protein kinase domain profile. 47 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02087 344 FunFam Serine/threonine-protein kinase PBS1 125 337 - -
Spst8g02087 344 Gene3D Phosphorylase Kinase; domain 1 18 124 - -
Spst8g02087 344 Gene3D Transferase(Phosphotransferase) domain 1 125 338 - -
Spst8g02087 344 PANTHER OS07G0668900 PROTEIN 25 328 - -
Spst8g02087 344 Pfam Protein kinase domain 47 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02087 344 SMART serkin_6 47 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02087 Spst-Chr8 29012015 29013242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02087 1 344 Glycoside Hydrolase AT3G07070 51.688 6.92e-132 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Spst8g02087 Pkinase 6.7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02087 - - gmx:100794722 540.806