Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02085 ATGTCGGCCAAGTTTCTGACCGTGCCGCCATTTGAGTGCGCCTGGAGAGAGGATTTGAAATTCCGGGAAGCAGGTCGGGGTTGTGTGGCCTTTGAAGCATTCGCCTGCAATGATGTTACACTGGTTTTCCGGGAGAATGTTGGAAGCCAGGGATACCATTATAAAAGAGATAGCAGTCCTCACTACACAATCATATTGGGGAGTCACAGGAATCGCCGACTCAGAATTGAGGTCAATGGAAAAGCTGTTGTTGACGTCGCAGGGGTTGGCCTTTGCTGCTCCTCCTCCTTTCAGAGTTATTGGATCAGCATTTACGATGGCTTGATTAGCATAGGCAATGGGAAATACCCTTTTCAGGATGTTGTTTTCCAGTGGTTGGATTCTTGTCCCAATTGTAATGTTCAGTATATTGGCCTGAGCAGCTGGGACAAACATGTTAAGTATAGAAATGTTAATGTTTTGTCCTTAACACACACTCATATGCCCCTTTCGAAGCATGTTGTTTTTGGTGATTATCAAGTGGAGGATGAGCTTGATGCAGCGGACTGTTACAGTTACAGACACATGGATTATGATGACAAATGGGGGCTAAAAACTTTTCTTGAGAGTTGGGACTTGTCTGATGTGTTATTCATAGTTGGTGAAGAGGAGAAGCCCGTTCCTGCTCACAAGGCAATTTTAGCTGCATCTGGAAACTTTTCTCTGTGCTCCTCCTCCTTTGTCATCAACATTCCCGCAGTACCTTATCCGCTTTTCCATGCACTGCTTCACTACATCTACGTTGGTTGGACCGAGATTCCACAAGAACAACTTGGTTCTTTGAGGGCTTTAAGTATACAGTTTGAAGTGATGCCACTGGTGAAGCAGTGTGAAGAGACTATGGAACGGTTGAAGCTAGATAAGAAGTTGTTTGACATGGGCAAGAATGTGGAGTTAACATATCCATCTATCCGACCTCATTGTTCAACTTTGCCCTCACTTCCTCTCAGCATTCAGCAACTGAGACAATTGAAATTAGCTGGCCAGTTCAGTGATGTAAGCATCTACATTGAGAGTTATGGGCTCGTGGCACGAGCACATAAAATTATTCTCAGCTTATGGAGTATCCCCTTTGCTCGGGTGAGCCAATTTCACAATCTTTTGTCAGATTTAATGTGA 1158 0.4439 MSAKFLTVPPFECAWREDLKFREAGRGCVAFEAFACNDVTLVFRENVGSQGYHYKRDSSPHYTIILGSHRNRRLRIEVNGKAVVDVAGVGLCCSSSFQSYWISIYDGLISIGNGKYPFQDVVFQWLDSCPNCNVQYIGLSSWDKHVKYRNVNVLSLTHTHMPLSKHVVFGDYQVEDELDAADCYSYRHMDYDDKWGLKTFLESWDLSDVLFIVGEEEKPVPAHKAILAASGNFSLCSSSFVINIPAVPYPLFHALLHYIYVGWTEIPQEQLGSLRALSIQFEVMPLVKQCEETMERLKLDKKLFDMGKNVELTYPSIRPHCSTLPSLPLSIQQLRQLKLAGQFSDVSIYIESYGLVARAHKIILSLWSIPFARVSQFHNLLSDLM 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02085 385 CDD BTB_POZ_ZBTB_KLHL-like 206 281 - -
Spst8g02085 385 Pfam Farnesoic acid 0-methyl transferase 50 146 IPR022041 -
Spst8g02085 385 SMART BTB_4 207 298 IPR000210 GO:0005515
Spst8g02085 385 ProSiteProfiles BTB domain profile. 207 268 IPR000210 GO:0005515
Spst8g02085 385 PANTHER OS05G0345500 PROTEIN 3 375 - -
Spst8g02085 385 Pfam BTB/POZ domain 198 295 IPR000210 GO:0005515
Spst8g02085 385 SUPERFAMILY POZ domain 196 295 IPR011333 -
Spst8g02085 385 Gene3D Potassium Channel Kv1.1; Chain A 195 311 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Spst8g02085 BTB 1.3e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02085 - - gmx:100810794 716.072