Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02084 ATGTTCACAAATGGAATGAGTGAAAGCATGTCCTCGGAGGTTACTTTAAGAGATGTGCCACCAGAAGCTTTCAAGGCTATGCTTGATTGTTTATATGATGGACAATTGCATGACAAAGTTATAGATTCTGGTGCTTTGTTGCTCCAACTCCTTTTATTAGCTGATCAATTTGGAGTGACTTTTCTGCAACAAGAATGCTGCAAAATGCTTTTAGAATCTCTCTCAGAGGACTCTGTATGTCCACTTCTTCAAGTGCTTTCTTCAATCCCATCATGCGGACTTATTAAAGAATCATTACAGAGGAGAATTTCCATGAACTTTGACTATTATATCAGTGCGAGTACTGACTTTGTTGTATTAGATGAGACAACTTTTATCAATATCATTAAGCATCCGGATCTGACAGTAACATCTGAAGAAAAAGTCCTTAATGCAATCCTTATGTTTGGCATGAATTGTAAAGAGTTGTTTGGGTGGGAAGTGGTGGATCAGTTTCTTGTAAATTCAAAACCTGAACTCCTTTTTGGTGACAGACTTCAGTTAGTATATGGCTTGTTGCCGTTTGTGCGATTTTCACTACTACAATATTCCTTACTTGAGAAGTTGCAGAATAGCAACATTGGCCAGCGTATCTCCGTTTTCCAAAATCTTGTTAATGAGGCAATCAATTTTGTTAAATATGGGCTAGCAGGGCTAGAAAATGAAGAGAAGAATTTTGATCACATAATCTATAGGATGATACTCTCTCTCTCTCAAGCTCCATACTCTATCCTTCCTCTTCTTTCTTGTTTTCTTTCTCCAGATAGCCGTTATAGGGTGCATGCCTGTGGTGTTTGGGGTGGGATAATAATGGATATGGGAAATGTTCGATTCCAACATAGACGGTCCAGTTACAAGGAACTCCAGTATATTTGCGATGGGGATGACCATGGAGTTCTATACTTTGCTGGCACATCCTATGGTGAACACCCTTGGGTTAATCCTCTTTTGGCTGAGCCAAGGAAAATTACCATAACAGCCAGCAGCCCCCACTCAAGATACACGGATCCCAAGGTTTTGGTCTCGAGAACCTACCAGGGAACATGCTTTGCTGGGCCCCGTTTGGAAAGTGGACAGAATTGTACCTGGTGGATGGTTGATCTTAGCCAAGATCATCAGCTTATGTGCAACTACTATACCCTAAGACAAGACGGTTCCAAGGCCTTCCCCAGATGTTGGAATATTGAGGGCTCACAGGAGGGGAAGAGCTGGACGAAGTTGCGGGTCCATGAAAATGACCGGAGTGTATGCAAACCTGGTCAGTTTGCCTCTTGGCCCATAATTGGCCCCAACGCTCTGCTTCCCTTCAGGTATTTCCGGGTTGTTCTCACTGGACCCACCACCGATGCCACCAATCCCTGGAATCTCTGCATTTGTTACTTGGAACTCTATGGCTACTTCCTCTGA 1446 0.4274 MFTNGMSESMSSEVTLRDVPPEAFKAMLDCLYDGQLHDKVIDSGALLLQLLLLADQFGVTFLQQECCKMLLESLSEDSVCPLLQVLSSIPSCGLIKESLQRRISMNFDYYISASTDFVVLDETTFINIIKHPDLTVTSEEKVLNAILMFGMNCKELFGWEVVDQFLVNSKPELLFGDRLQLVYGLLPFVRFSLLQYSLLEKLQNSNIGQRISVFQNLVNEAINFVKYGLAGLENEEKNFDHIIYRMILSLSQAPYSILPLLSCFLSPDSRYRVHACGVWGGIIMDMGNVRFQHRRSSYKELQYICDGDDHGVLYFAGTSYGEHPWVNPLLAEPRKITITASSPHSRYTDPKVLVSRTYQGTCFAGPRLESGQNCTWWMVDLSQDHQLMCNYYTLRQDGSKAFPRCWNIEGSQEGKSWTKLRVHENDRSVCKPGQFASWPIIGPNALLPFRYFRVVLTGPTTDATNPWNLCICYLELYGYFL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02084 481 Pfam BTB And C-terminal Kelch 86 149 IPR011705 -
Spst8g02084 481 SUPERFAMILY Galactose-binding domain-like 336 480 IPR008979 -
Spst8g02084 481 SUPERFAMILY POZ domain 1 72 IPR011333 -
Spst8g02084 481 Pfam F5/8 type C domain 338 470 IPR000421 -
Spst8g02084 481 CDD BTB_POZ_ZBTB_KLHL-like 1 37 - -
Spst8g02084 481 Pfam BTB/POZ domain 1 73 IPR000210 GO:0005515
Spst8g02084 481 Gene3D - 103 225 - -
Spst8g02084 481 Gene3D - 333 479 - -
Spst8g02084 481 Gene3D Potassium Channel Kv1.1; Chain A 1 102 IPR011333 -
Spst8g02084 481 PANTHER OS05G0345500 PROTEIN 1 481 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02084 - - gmx:100810794 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02084 8 28868356 28872098 Spst8g02084 8 28868356 28872098 ECH