Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02053 ATGGGAGTGGGGTTCTCAAAGGTGTTAACACACAAATCAGACCATGAAATTCCAATTTCTTCCCCAGATACCGGTCCTCAACTCACCTACAAACAACCTCGCAAAAACCTCCCCATTCCACGTCCACTTCCTCCTCCCATGCCAACCGAATGTTCTTCACAAACAAGACCTGTTCTGGGGAGACCTTACGTTAAAATAAAGCACATGTACGAGATGAAGGAAGAGCTCGGAAGAGGTAAGTTTGGTGTGACTTATCTGTGTGTAGAGAAGGCCACAGGAATTGCGTATGCATGCAAATCCATAGCAAAGAAGAGGCCACAAGAAGATGAGAATGTTAGAAGAGAGGTTATGATTCTGCAGCATCTTTCGGGGCAACATAACATAGTGGAATTCAAGGGAGCTTTTGAGGACAGGGAGATGGTACATCTCGTGATGGAGTTGTGCAGTGGAGGTGAACTCTTTGACCGTATTATTGCGAAAGGGAGACACTCGGAGCGTGAAGCAGCCACAGTGATGAGACAGATTGTGAGGATTGTTGACGTGTGCCATTTCATGGGTGTGGTGCATCGAGACCTCAAGCCCGAGAATTTCTTGTTCGCCACCAAGGACGAGCTTGCCTCTTTGAAACTCACGGATTTTGGATCCTCTGTCTTCTTTCACAAAGGTTATTACAGCTTTCATGCATATCCATGTTCTTTACTTATTATCAGCTTTTTTGAAGTGTTCTTTCGCACTTTGCTTTTGTCTAGGAGTTAG 756 0.4524 MGVGFSKVLTHKSDHEIPISSPDTGPQLTYKQPRKNLPIPRPLPPPMPTECSSQTRPVLGRPYVKIKHMYEMKEELGRGKFGVTYLCVEKATGIAYACKSIAKKRPQEDENVRREVMILQHLSGQHNIVEFKGAFEDREMVHLVMELCSGGELFDRIIAKGRHSEREAATVMRQIVRIVDVCHFMGVVHRDLKPENFLFATKDELASLKLTDFGSSVFFHKGYYSFHAYPCSLLIISFFEVFFRTLLLSRS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02053 251 PANTHER SERINE/THREONINE-PROTEIN KINASE 65 221 - -
Spst8g02053 251 SUPERFAMILY Protein kinase-like (PK-like) 45 224 IPR011009 -
Spst8g02053 251 MobiDBLite consensus disorder prediction 37 51 - -
Spst8g02053 251 Pfam Protein kinase domain 70 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02053 251 FunFam Calcium-dependent protein kinase 1 72 152 - -
Spst8g02053 251 Coils Coil 248 251 - -
Spst8g02053 251 MobiDBLite consensus disorder prediction 14 54 - -
Spst8g02053 251 SMART serkin_6 70 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02053 251 ProSiteProfiles Protein kinase domain profile. 70 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02053 251 Gene3D Phosphorylase Kinase; domain 1 72 152 - -
Spst8g02053 251 Gene3D Transferase(Phosphotransferase) domain 1 153 231 - -
Spst8g02053 251 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Spst8g02053 251 ProSitePatterns Protein kinases ATP-binding region signature. 76 104 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02053 Spst-Chr8 28374399 28375154 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02053 29 222 EF-hand Containing Proteins AT1G50700 57.576 4.68e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst8g02053 Pkinase 5.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02053 K13412 - gmx:100792610 351.288