Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02050 ATGGGGTTGGGGTTGTTTAAGGCGTTGTTTTGCTGCACCAAGCGCCAAGAAATTGAAATCGCAGACTCATGGGAGTCCTCTTCTGAGCATAGCCACAAAGAAGATTCTAGAGCGAGCAAAGAAAAGGCGAAGGCAGTTGCAGGTGTTCCTTCGAAACAAACGAGCATGTCACAAATAGGACCAATTCTGGGAAAGCCGTACGTGAACATAGAGCAAATATACGAGATGAAGAAAGAGCTGGGAAGCGGGCAATCGGGTGTGACGTATCTGTGCGTGGAGAGGACGACGCAGCGAGAGTACGCATGCAAGTCGATTGCTCGGTCGAAGCTGCTGAGTGAGGTGGAGATCGAGGATGTGAGAAGAGAGGTTATGATTCTGCAGCACCTGTCGGGGCAACCCAACATCGTGGAATTCAGAGGGGCTTACGAGGACAGGCAGCACGTGCATCTCGTGATGGAGCTCTGCAGTGGCGGCGAACTCTTCGACCGCATCATCGCCAAAGGGAACTACTCCGAGCGCGAGGCGGCGACGGTGATGAGGCAGATTGTGAAGGTGGTTCACGTCTGCCATTTCATGGGCGTCATGCATCGAGACCTCAAGCCGGAGAATTTCTTGTTAGCCACCAAAAACAACAATGCTCCCGTCAAAGCCACTGATTTTGGACTCTCCATTTTCATCGAGGAAGTTCTTTTCTCTCGTTTAGAAATAGAGTGTGTATTGGCTCTGTCATCTGACTTCCGTCTGCGTTGA 750 0.512 MGLGLFKALFCCTKRQEIEIADSWESSSEHSHKEDSRASKEKAKAVAGVPSKQTSMSQIGPILGKPYVNIEQIYEMKKELGSGQSGVTYLCVERTTQREYACKSIARSKLLSEVEIEDVRREVMILQHLSGQPNIVEFRGAYEDRQHVHLVMELCSGGELFDRIIAKGNYSEREAATVMRQIVKVVHVCHFMGVMHRDLKPENFLLATKNNNAPVKATDFGLSIFIEEVLFSRLEIECVLALSSDFRLR 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02050 249 ProSiteProfiles Protein kinase domain profile. 74 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02050 249 SUPERFAMILY Protein kinase-like (PK-like) 74 228 IPR011009 -
Spst8g02050 249 Pfam Protein kinase domain 74 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02050 249 MobiDBLite consensus disorder prediction 23 50 - -
Spst8g02050 249 FunFam Calcium-dependent protein kinase 1 76 159 - -
Spst8g02050 249 PANTHER SERINE/THREONINE-PROTEIN KINASE 69 228 - -
Spst8g02050 249 Gene3D Phosphorylase Kinase; domain 1 76 159 - -
Spst8g02050 249 SMART serkin_6 74 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02050 249 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Spst8g02050 249 ProSitePatterns Protein kinases ATP-binding region signature. 80 103 IPR017441 GO:0005524
Spst8g02050 249 MobiDBLite consensus disorder prediction 23 42 - -
Spst8g02050 249 Gene3D Transferase(Phosphotransferase) domain 1 160 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02050 Spst-Chr8 28367312 28368140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02050 11 225 EF-hand Containing Proteins AT5G12180 54.299 5.39e-84 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst8g02050 Pkinase 4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02050 K13412 - gmx:100816157 355.91