Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02043 ATGGCAGCAATTGCTACAGTGATGGTGGTCATAACTACCATGCACTTTGCTCCTCTTGTGAGTGCATTAAATGTAAACTACTATGAAAATACCTGCCCTCATGTGGACTCCATTGTTGCTACTTCTGTTCACCACGCAACCATGAACGACAAAACTGTCCCAGCTGCTCTCCTTCGGATGCATTTTCATGATTGCTTCATAAGGGGTTGTGATGCTTCTGTTCTTCTGGAATCAGAGGGAGAGAACAAAGCAGAAAAAGATGGACCTCCTAACATTTCATTGCATGCATTTTATGTCATTGACAATGCTAAGAAAGCACTGGAAGAAGTTTGCCCCGGGGTCGTGTCTTGTGCTGATATTTTGGCTCTTGCTGCTAGGGATGCTGTTACCCTGTCCGGAGGCCCCACTTGGGATGTTCCAAAAGGAAGAAAGGATGGAAGGATATCAAAGGCCACTGAAACCAGACAATTGCCAGCTCCTACTTTCAACATCTCCCAATTACAACAAACCTTCTCTCAAAGAAGCCTCTCCCTGGAGGATCTTGTAGCCCTCTCAGGAGGTCACACACTTGGATTTGCTCATTGTTCATCCTTTGAGAACAGAATCCATAAATTCAGCCCCAAACAAGACATTGATCCTTCTCTGAACCCTTCATTTGCAAGCAGCCTCAGAAGCATATGTCCCTTTGATAACAAGGTGAGAAATGCAGGGACCTCATTGGATTCCAGTGCCACCTTGTTTGACAATGCTTATTACAAGTTGCTCCTCCAAGGAAAGAGCATATTCTCTTCTGATCAAGCTCTGCTCACTCATCCCACCACTAAAGCTTTGGTTTCCAAGTTTGCTTGTTCTCCACAGGAATTTGAAAGGGCCTTCGTCAAGTCCATGATCAAGATGAGCAGCATCACCGACGGTGGACAAGAAATCAGGCACGACTGTAGATTCGTCAGATGA 954 0.4528 MAAIATVMVVITTMHFAPLVSALNVNYYENTCPHVDSIVATSVHHATMNDKTVPAALLRMHFHDCFIRGCDASVLLESEGENKAEKDGPPNISLHAFYVIDNAKKALEEVCPGVVSCADILALAARDAVTLSGGPTWDVPKGRKDGRISKATETRQLPAPTFNISQLQQTFSQRSLSLEDLVALSGGHTLGFAHCSSFENRIHKFSPKQDIDPSLNPSFASSLRSICPFDNKVRNAGTSLDSSATLFDNAYYKLLLQGKSIFSSDQALLTHPTTKALVSKFACSPQEFERAFVKSMIKMSSITDGGQEIRHDCRFVR 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02043 317 Gene3D Peroxidase, domain 2 158 299 - -
Spst8g02043 317 PANTHER PEROXIDASE 25-RELATED 12 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 FunFam Peroxidase 158 299 - -
Spst8g02043 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Spst8g02043 317 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 Gene3D - 26 316 - -
Spst8g02043 317 ProSiteProfiles Plant heme peroxidase family profile. 22 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 Pfam Peroxidase 41 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 FunFam Peroxidase 26 169 - -
Spst8g02043 317 SUPERFAMILY Heme-dependent peroxidases 23 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst8g02043 317 CDD secretory_peroxidase 23 316 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02043 Spst-Chr8 28283123 28284778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02043 7 317 Peroxidase AT5G42180 70.418 7.29e-170 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02043 K00430 - gmx:100820056 544.273