Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02041 ATGGCTGCAACAACACCGAATCACTCACTAACCGTATCTGGGTGGGCAGCTCATGATTCTTCGGGCAAGATTAGCAGCTATACCTTCAAAAGAAGGGAAAACGGTGTTAACGATGTGACCATAAAGATCTTGTATTGTGGGATCTGCCACACTGACCTTCACTATGCTAAAGATGAATGGGGCATTACCATGTACCCTGTGGTACCCGGGCACGAGATAGTTGGAGTGATAACTAAGACTGGAAGCGATGTGAAAGGGTTCAAGGAAGGAGATAGAGTGGGTGTGGGGTGTTTGGCAGCTTCATGTTTGGATTGTGAACACTGCAAGACCGACCAGGAAAATTACTGCGACAAGTTGCAATTTGTGTACAACGGAATCTTCTGGGATGGCAGCATCACCTATGGTGGCTACTCCCAAATCTTTGTTGCAGATTACAGATATGTGGTACACATTCCGGAGAGCCTGCCAATGGATGCGGCGGCTCCTCTGCTGTGCGCCGGAATAACAGTGTTCAGTCCTCTGAAAGACCACGATTTGGTGGCCTCGCCGGGGAAAAAGATTGGGGTGGTTGGTTTGGGAGGGCTTGGACACATAGCCGTTAAATTTGGGAAGGCATTTGGGCACCATGTTACTGTCATCAGCACTTCCCCTTCCAAAGAGGCTGAAGCTAAGCAACATCTGGGAGCTGATGAGTTCATACTCAGCTCCAACCCTACACAATTACAGGGTGCAAGGAGAAGCCTAGATTTCATACTGGACACTGTTTCTGCAGAGCACGCTCTCGTTCCCATGTTGGAATTGCTCAAAGTAAACGGCACCTTATTTATCGTGGGTGCACCGGACAAGCCCCTCCAATTGCCTGCTTTTCCATTGATTTTTGGGAAGAGATCAGTGAAAGGTGGGATCATTGGGGGAATAAAAGAGACTCAGGAAATGATGAATGTTTGTGCCAAGTACAACATAACGAGTGACATTGAGTTAATCACACCAGACAGAATCAACGAGGCCATGGAACGTCTTGCCAAGAATGATGTTCGCTACCGTTTCGTCATTGACATTGCTGCTGCCACTTCCAACAACTAG 1083 0.4783 MAATTPNHSLTVSGWAAHDSSGKISSYTFKRRENGVNDVTIKILYCGICHTDLHYAKDEWGITMYPVVPGHEIVGVITKTGSDVKGFKEGDRVGVGCLAASCLDCEHCKTDQENYCDKLQFVYNGIFWDGSITYGGYSQIFVADYRYVVHIPESLPMDAAAPLLCAGITVFSPLKDHDLVASPGKKIGVVGLGGLGHIAVKFGKAFGHHVTVISTSPSKEAEAKQHLGADEFILSSNPTQLQGARRSLDFILDTVSAEHALVPMLELLKVNGTLFIVGAPDKPLQLPAFPLIFGKRSVKGGIIGGIKETQEMMNVCAKYNITSDIELITPDRINEAMERLAKNDVRYRFVIDIAAATSNN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02041 360 MobiDBLite consensus disorder prediction 1 20 - -
Spst8g02041 360 FunFam probable cinnamyl alcohol dehydrogenase 15 173 - -
Spst8g02041 360 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Spst8g02041 360 CDD CAD1 14 352 IPR047109 GO:0016616
Spst8g02041 360 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Spst8g02041 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Spst8g02041 360 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Spst8g02041 360 Gene3D - 166 323 - -
Spst8g02041 360 SUPERFAMILY GroES-like 18 177 IPR011032 -
Spst8g02041 360 SMART PKS_ER_names_mod 22 351 IPR020843 GO:0016491
Spst8g02041 360 PANTHER ALDEHYDE REDUCTASE 7 355 IPR047109 GO:0016616
Spst8g02041 360 Gene3D - 15 353 - -
Spst8g02041 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02041 Spst-Chr8 28273624 28275306 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02041 14 354 Monolignol Biosynthesis Gene Families AT2G21730 59.064 1.64e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02041 K00083 - gmx:100820588 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02041 8 28273624 28275306 Spst8g02041 8 28273624 28275306 ECH