Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02040 ATGGATCACAAATTTTGGGAGAGAGTAGCAACGATTTTTTTTGCTTTCTTTGCTATCAGATTTCCCAAAGGAGTAGCTGTTAACGCAGCAGTTCCAGCATTGTTTGCATTTGGAGACTCAATCCTTGACACGGGAAACAATAACAACCTTGTAACGTTAACCAAGAGCAATTATCCTCCCTATGGAAGGGACTTCGAAGGAGGAAGACCTACAGGAAGATTTTGTAATGGAAAAACTCCCACAGATTTGATAGCAACGGCGTTGGGAATAAAAGAATCAGTGCCAGCATATCTCAGTGGCAACTTGAGCCCTCAAGACCTCATCACTGGGGTTTGCTTTGCTTCTGCTGGGTCTGGGATTGATGATCGCACTTCTCAAATACAGAGTCTATATGATCTTGGAGTACGAAAAGTGTGGGTACTGAGTACATTGCCACTGGGATGCTTACCTGGAGGTAGAACTTTAGCAGGGGGACCATTGAGAATTTGTGCACCCATTCCGAATCTAGAAGCACAGACATTCAATGGCCAGTTATCATCCGCAGTTGATTCTATCAGAGCCAGCCTTACAAATTACGACATTAGATTCATCGATGTCTATACTCCTTTCCTGAATCTCATAAATAATCCTCAGCCATCAGGGTTTACTGACGTAGCAGAAGGGTGTTGTGGGAGTGGTTCATTCGGATCTTCATTGCCGTGTACCCTTCTCAGTGTGTGTCCAAATCCTGCGACTTACATTTTCTGGGATTTGGCCCATCCAACTGAGAGAGCTTATCAGCTTGTGGTACTCGTGGAAATTGTGCATGGTCGTTCCCTTCTGATATGTATTTGTGAGCATGCACCATTTACAACGAAGAACATTTTGTGTCCATCAACAGCTAAGATGGATGCAGATATCATCGTCAACAACTTAAAACCCGCATGGAGGATATTTAACTACAAATATTGTTTGAGAATGAAGAGAGCATTCTTCTTAGCATCGTGGAATTACAAAGAAAAACCATTTTAA 1011 0.4263 MDHKFWERVATIFFAFFAIRFPKGVAVNAAVPALFAFGDSILDTGNNNNLVTLTKSNYPPYGRDFEGGRPTGRFCNGKTPTDLIATALGIKESVPAYLSGNLSPQDLITGVCFASAGSGIDDRTSQIQSLYDLGVRKVWVLSTLPLGCLPGGRTLAGGPLRICAPIPNLEAQTFNGQLSSAVDSIRASLTNYDIRFIDVYTPFLNLINNPQPSGFTDVAEGCCGSGSFGSSLPCTLLSVCPNPATYIFWDLAHPTERAYQLVVLVEIVHGRSLLICICEHAPFTTKNILCPSTAKMDADIIVNNLKPAWRIFNYKYCLRMKRAFFLASWNYKEKPF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02040 336 Pfam GDSL-like Lipase/Acylhydrolase 123 262 IPR001087 GO:0016788
Spst8g02040 336 Pfam GDSL-like Lipase/Acylhydrolase 34 122 IPR001087 GO:0016788
Spst8g02040 336 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 34 45 IPR008265 GO:0006629|GO:0016298
Spst8g02040 336 SUPERFAMILY SGNH hydrolase 36 262 - -
Spst8g02040 336 CDD SGNH_plant_lipase_like 32 263 IPR035669 -
Spst8g02040 336 Gene3D SGNH hydrolase 125 266 IPR036514 -
Spst8g02040 336 Gene3D SGNH hydrolase 22 124 IPR036514 -
Spst8g02040 336 PANTHER GDSL ESTERASE/LIPASE EXL3 17 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02040 Spst-Chr8 28233459 28238213 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02040 127 262 Pollen Coat Proteome AT1G75910 33.571 6.94e-23 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02040 - - gmx:100789445 268.47