Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02029 ATGGTTCGCCGAACACTATCACTGTTCTCATTCTTTCTAACATTTTATCTAACAGTATCAGGGGTGATTTCAACCACATTCACTCTTGTTAACAAATGTGACTACACGGTGTGGCCGGGGATTCTCTCAAACGCGGGTGTTCCTCCTCTTTCAACCACCGGCTTCGTTCTACAAACAGGCGCCTCCACCACAATCGCTCCACCCGCGTCTTGGGGAGGCCGTTTCTGGGGCCGAACGCTCTGCTCCGAAGACGCCACCGGCAAGTTCTCCTGCGTCACCGGCGACTGCGGTTCCGGAAAGCTCGAATGCGCCGGGAACGGCGCCACGCCGCCGGCGACTCTAGCGGAGTTCACCCTCAACGGCGCAGGAGGCCTTGATTTCTTCGACGTAAGCCTTGTGGACGGCTACAACGTGCCGATGCTGGTGGTGCCGCAGGGAGGCTCCGGCGAGAAGTGCACCGCCACGGGCTGCGTCGGGGACCTCAACAGCGCGTGTCCATCGGAGCTGAAAGTTATGAGCGCGGACGGGAGAGAGAACGTCGCCTGCAAGAGCGCGTGCGAAGCATTCAACTCGCCGCAATATTGCTGCAGCGGCGCGTACGGCACTCCCGACACGTGCAAGCCATCGTCTTACTCTGAGATATTCAAGAACGCATGTCCACGCGCTTATAGCTACGCGTACGACGACAAAACCAGCACCTTCACTTGCGCCTCCGCCGATTACACCATCACCTTTTGCCCTCCCCTACCACCAGATGATAATTATTGTTCTTTTACCATTTTCAGTCAGAAGGCATCGCAGGGACAACAAGATGGTTTTTCTCCCACCACGCCACTGCTTAACAACGGCACCATGGTGTACCAAGGTGGTTTCGATCAGAGTGCAATCTCGTGGGCCACATCCAGCCACGTGTTCCAATCGCAAGCCGTTGCCGGCATAGTCAGTGTCGCGTTGGCAATGTGGCACTTGTGCCACCTCTTCTAA 984 0.565 MVRRTLSLFSFFLTFYLTVSGVISTTFTLVNKCDYTVWPGILSNAGVPPLSTTGFVLQTGASTTIAPPASWGGRFWGRTLCSEDATGKFSCVTGDCGSGKLECAGNGATPPATLAEFTLNGAGGLDFFDVSLVDGYNVPMLVVPQGGSGEKCTATGCVGDLNSACPSELKVMSADGRENVACKSACEAFNSPQYCCSGAYGTPDTCKPSSYSEIFKNACPRAYSYAYDDKTSTFTCASADYTITFCPPLPPDDNYCSFTIFSQKASQGQQDGFSPTTPLLNNGTMVYQGGFDQSAISWATSSHVFQSQAVAGIVSVALAMWHLCHLF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02029 327 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Spst8g02029 327 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Spst8g02029 327 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Spst8g02029 327 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Spst8g02029 327 PANTHER OS03G0233200 PROTEIN 11 247 IPR001938 -
Spst8g02029 327 CDD TLP-PA 26 246 - -
Spst8g02029 327 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Spst8g02029 327 Gene3D Thaumatin 25 247 IPR037176 -
Spst8g02029 327 SUPERFAMILY Osmotin, thaumatin-like protein 25 248 IPR037176 -
Spst8g02029 327 FunFam THAUMATIN-LIKE PROTEIN 1 25 247 - -
Spst8g02029 327 Pfam Thaumatin family 31 247 IPR001938 -
Spst8g02029 327 ProSiteProfiles Thaumatin family profile. 24 247 IPR001938 -
Spst8g02029 327 SMART tha2 27 247 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02029 Spst-Chr8 27956428 27958486 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02029 5 247 Receptor kinase-like Gene Family AT5G38280 55.691 1.09e-91 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02029 - - gmx:100787631 550.436