Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02015 ATGGAAATCAAGAACATGGTAGAGGGATCAGCTCCTAGCCCTTCCCCTTCACCTTCACCTCCAATCATAGATTGTGATGCCGAATGCAGTAGAAGGTGTCAATTATCATCAAGACCAAATCTATGTAAGAGAGCATGTGGAACATGTTGTGAAAAGTGCAATTGTGTGCCTTCGGGAACCAATGGTCACTATGAAGAATGTCCATGCTACGCAAATTTGACTACTCATGGTGGAAGACACAAGTGTCCTTAA 252 0.4325 MEIKNMVEGSAPSPSPSPSPPIIDCDAECSRRCQLSSRPNLCKRACGTCCEKCNCVPSGTNGHYEECPCYANLTTHGGRHKCP 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02015 83 Pfam Gibberellin regulated protein 24 83 IPR003854 -
Spst8g02015 83 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 23 83 - -
Spst8g02015 83 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02015 Spst-Chr8 27709159 27710535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02015 - - gmx:100306171 150.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02015 8 27709159 27710535 Spst8g02015 8 27709159 27710535 ECH
Spst9g00287 9 2703096 2703609 Spst8g02015 8 27709159 27710535 PCT