Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02001 ATGCAGATAAGATCTTCTTATCACGATGTGGTGAGAGTACAAGACATTGAAGATGAGTTGGACACAAGTGGGGTTCAATCCTACGTTATCAACAACTTTGATGTTGTTTTTCTGAACAAAAGGGGTTTTGACGTGTGTAGGACCAAAAAGAATAGTAAAAGTTGTAGAAACACTTTGCCTTGCGAGATATGCAGAAGAAATATTTCAAATGCTTTTCATTTTTGTTCTTTGGGATGTAAGGTTGGTCTTCCTCACTAT 258 0.3682 MQIRSSYHDVVRVQDIEDELDTSGVQSYVINNFDVVFLNKRGFDVCRTKKNSKSCRNTLPCEICRRNISNAFHFCSLGCKVGLPHY 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02001 86 Pfam PLATZ transcription factor 4 81 IPR006734 -
Spst8g02001 86 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02001 Spst-Chr8 27487458 27487715 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Spst8g02001 PLATZ 2.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02001 - - ccaj:109811643 103.605