Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01956 ATGTATCCAAACCAAGCGTTTCCTTCAGGGTCCTATGCAAATATGTTGTCTGGGAATCCTCTTTTACCTCATAACTACAGTGAAACTGTTGGAGGACAAAATGAGTTGAAGTTCATGACATCCATGAGGGACACAATGACTATGCAACCTATTGATGGGCATTCAAATGCTCCCACCTCAGCTGATCAAGACTCTTTTTGTCATGCTGGAGATTGCCAATCCCATGTTATTCCAAGGACAGCACAACTGGGACTTGTGGACAGTGAGCAAAATGTACAGAACCAAGGCTTGTCTCTTAGCCTTGGCTCTGTGATGCCTTCTATTGCATCGGTCCCTACCTTTCCATACCAGTATCCTGGCACCGGTTTCTCTTCACTAATGACTGCTTCTGTCCCAAATTTAAAGGGCACATCATCTCTTAAAGATGATGAGGCCAGCCTACAAATGGAATTGAGGAATACTGAGTGCATGGCATCTTTAGCTTCTTGTGGCTATCACAAAAGGGATGGTTTGCTGTATGCTCCACAACACCCCTTAATGTGCCTCAGTGAAGGCCAAAGCGATGGATCGCTGGGCTTTTCCAGCAGTGTCTTGAACTCACAATACCTCAAGGCAGCACAGGAGTTGCTTGATGAAATAGTTAATGTTCGAAAGGCTTTGAAGCAAACTGGTTTAGAGAAGCAACAGAGTTTCCGTGATATTGATTTAGATGGCTCCAAAGATTCTGAAGGTAAATCTAACAGCCAATCAGTGCAGATATCTTCAGGCCCCAGTGGTTCTGCTGCAAATTCTTCATGTGAGCTATCACCTGCAGAACGACAGAATTTGTTGGACAAGAAGACAAAACTTTTGTCTATGTTGGATGAGGTTGATAAAAGATACAGACAGTACTGCCACCAGATGCAGATTGTGGTTTCGTCTTTTGATATGATTGCTGGTTGCGGAGCAGCTGAACCATACACTGCACTTGCCTTGCGCACAATATCACGACACTTTCGTTGTTTGCGTGATGCCATCAGTGGCCAAATTCAAGTGACTCAAAGGAGCCTTGGAGAACAAGAGGGGATACCTCGTCTCCGGCATGTTGATCAGCAGCTTCGGCAACAAAAGGCCATCCAGCAACTTGGTGTAATGCGACAAACTTGGAGGCCTCAAAGGGGACTTCCTGAAACCTCTGTTTCAATACTTAGGGCATGGCTCTTTGAGCATTTCCTTCATCC 1220 0.4516 MYPNQAFPSGSYANMLSGNPLLPHNYSETVGGQNELKFMTSMRDTMTMQPIDGHSNAPTSADQDSFCHAGDCQSHVIPRTAQLGLVDSEQNVQNQGLSLSLGSVMPSIASVPTFPYQYPGTGFSSLMTASVPNLKGTSSLKDDEASLQMELRNTECMASLASCGYHKRDGLLYAPQHPLMCLSEGQSDGSLGFSSSVLNSQYLKAAQELLDEIVNVRKALKQTGLEKQQSFRDIDLDGSKDSEGKSNSQSVQISSGPSGSAANSSCELSPAERQNLLDKKTKLLSMLDEVDKRYRQYCHQMQIVVSSFDMIAGCGAAEPYTALALRTISRHFRCLRDAISGQIQVTQRSLGEQEGIPRLRHVDQQLRQQKAIQQLGVMRQTWRPQRGLPETSVSILRAWLFEHFLHP 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01956 407 MobiDBLite consensus disorder prediction 243 267 - -
Spst8g01956 407 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 90 407 - -
Spst8g01956 407 Coils Coil 203 223 - -
Spst8g01956 407 SMART prehox3 191 341 IPR006563 -
Spst8g01956 407 MobiDBLite consensus disorder prediction 231 267 - -
Spst8g01956 407 Pfam Associated with HOX 197 340 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01956 Spst-Chr8 26108603 26110439 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01956 192 407 Homeobox Transcription Factor Family AT2G16400 60.000 1.15e-81 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01956 - - gmx:100775682 684.485