Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01954 ATGTATCAAAACCAAGCGTTTTCTTCAGGGTCCTATGCAGATATGTTGTCTGGAAATCCTCTTTTACCTTATAACTACAGTGAAAATGTTGGAGGACAAAATGAGTTGAAATTCATGACATATATGAGGGACACAATGACTATGCAATCTATTCATGGGCATTCAAATGCTGCTGCCGCAGCTGATCAAGACACTTTTGCTAATGCCGGAGATTCCCATTCCCATATTATTCCAAGGACAACACAATTGGGACTTGTGGACAGTGAGCAAAATGTACATAACCAATGCTTGTCTCTTAGCCTTGGATCTGTGATCCCTTCTATTGCATCAGTCCCTACCTTTCCATACCATTATCCTGGCACCGGATTCTCTCCACTAATGACTGCTTCTGTCCCAAATTTAAAGGGTACTTCATCTGTTAAAGATGATGAGGCCAGTCTACAAATGGAATTGAGAAATACTGAGTGCATGGCATCTTTAGCTTCTTGTGGCTATCACAAAAGGGATGGTTTGTTGTATACACCACCACACCCATTAATGTGCCTCAGTGAAGGCCAAAGCGATGGATCGCTAGGCTTTCCCAGCAGTGTCTTGAACTCACAATACCTCAAGGCAGCACAGGAATTGCTTGATGAAATAGTTAATGTGCGAAAAGCTTCGAAGCAAACTGCTTTAGAGAAGCAACAGAGTTTCCGTGATATTGATTTAGATGGCTCCAAGGATTCTGAAGGTAAATCTAACAGCCAATCAGTGCAGATATCTTCAGGCCCCAGTAGTTCTGCTGCAAATTCTTCACGTGATCTATCACCTGCAGAACGACATAATTTGCTGGACAAGAAAACAAAACTTTTGTCTATGTTGGATGAGGTTGATGAACGATACAGACATTACTGCCACCAGATGCAGATAGTGGTTTCATCTTTTGATACGGTTGCTGGTTATGGAGCAGCTGAACCATACACTGCACTTGCCTTGCGCACAATATCACGCCACTTCCGGTGTTTGCGCGATGCCATCAGTGGCCAAATTCTAGTGACTCAAAAGAGCCTTGGAGAACAAGAAGGGATACCTCGTCTCCGCAATGTTGATCAGCAGCTTAGGCAACAAAAGGCTCTTCAGCAACTTGGTGTAATGCGACAAGCTTGGAGACCTCAGAGGGGACTTCCTGAAACCTCTGTTTCTATACTTCGTGCATGGCTCTTTGAACATTTCCTTCATCC 1220 0.4352 MYQNQAFSSGSYADMLSGNPLLPYNYSENVGGQNELKFMTYMRDTMTMQSIHGHSNAAAAADQDTFANAGDSHSHIIPRTTQLGLVDSEQNVHNQCLSLSLGSVIPSIASVPTFPYHYPGTGFSPLMTASVPNLKGTSSVKDDEASLQMELRNTECMASLASCGYHKRDGLLYTPPHPLMCLSEGQSDGSLGFPSSVLNSQYLKAAQELLDEIVNVRKASKQTALEKQQSFRDIDLDGSKDSEGKSNSQSVQISSGPSSSAANSSRDLSPAERHNLLDKKTKLLSMLDEVDERYRHYCHQMQIVVSSFDTVAGYGAAEPYTALALRTISRHFRCLRDAISGQILVTQKSLGEQEGIPRLRNVDQQLRQQKALQQLGVMRQAWRPQRGLPETSVSILRAWLFEHFLHP 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01954 407 SMART prehox3 191 341 IPR006563 -
Spst8g01954 407 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 72 407 - -
Spst8g01954 407 Pfam Associated with HOX 197 340 IPR006563 -
Spst8g01954 407 MobiDBLite consensus disorder prediction 243 270 - -
Spst8g01954 407 MobiDBLite consensus disorder prediction 230 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01954 Spst-Chr8 26037431 26039223 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01954 192 407 Homeobox Transcription Factor Family AT2G16400 58.667 2.07e-77 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01954 - - gmx:100775682 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01954 8 26037431 26039223 Spst8g01954 8 26037431 26039223 ECH
Spst9g00342 9 3203102 3203848 Spst8g01954 8 26037431 26039223 PCT