Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01927 ATGAACAAGAACGTATCCGAAAACTCGCCGCCGATGACAAGAACCCTTCACTTGATGTGGGGCCTAATGGTCATCCTCTATTCACCTCGGCACCTTCCCTCTCCCGCAACGATGCCCGCACCTACTTCAAGCTCACGTATTGTTCCCACTAACCTCGTTTTTCGTTGTGGCATTCTGTCGAACAGTATGTCGAATGGGGTCTGTCGAATGGTGGTTAGTGGTTCTGATGGTTTAGTTTTAAAAAATTTTGAGGTCCCCACAGGTTGGAAGTTCTTTGGTAATTTAATGGATGTTGGATTATGTTGTGGTGAAGAAAGTTTTGGGACTGTAAATAGTGTCAACCACAACAGTGGAAGGAATCTTCTTATCATGGCTAACCTCAGAATGAGTTGTACTGCATTGTTTTCCACCTTATCTCAAGCACTTGTCTTCCTTGCTTTGTTTTTCGAGTATAATAAAATGACTGAACAACTAGGGGTGCTAAAAATCATTGTTGTGCAAGGGAAAAGGTTGGTGATCCGAGATTTCAAGAATAGTGATCCTTATGTTGTGCTCAAACTAGGGAACCAGACTGCAAAGACCAAGGTAATTAATAGCTGCTTGAATCCTGTTGGAATGAAGAACTAA 627 0.4242 MNKNVSENSPPMTRTLHLMWGLMVILYSPRHLPSPATMPAPTSSSRIVPTNLVFRCGILSNSMSNGVCRMVVSGSDGLVLKNFEVPTGWKFFGNLMDVGLCCGEESFGTVNSVNHNSGRNLLIMANLRMSCTALFSTLSQALVFLALFFEYNKMTEQLGVLKIIVVQGKRLVIRDFKNSDPYVVLKLGNQTAKTKVINSCLNPVGMKN 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01927 208 SUPERFAMILY Phosphoglucomutase, first 3 domains 78 126 IPR016055 GO:0005975|GO:0016868
Spst8g01927 208 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 151 204 IPR035892 -
Spst8g01927 208 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 58 118 IPR005846 GO:0005975|GO:0016868
Spst8g01927 208 Pfam C2 domain 160 204 IPR000008 -
Spst8g01927 208 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 151 204 IPR044518 GO:0005096|GO:0005543
Spst8g01927 208 Gene3D - 57 146 - -
Spst8g01927 208 Gene3D C2 domain 147 204 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01927 Spst-Chr8 24809663 24811317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01927 154 204 C2H2 Transcription Factor Family AT4G05330 54.902 1.52e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01927 - K10859 gmx:100779624 95.9005