Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01907 ATGGGGGAAATTGCAGTGAGTGTGGTTTCAATGTTGTTGTTAATGGTTGGGTTAACAATGGGAATGGGTTTGAGTTCGAGAACGGAATGGTTTGCATTAAGGGAACTTCGATCGTCGTTGGGGATTAGGGCAAAGTATTGGCCCATTAAAGCCGAACCGTGCGGGAACTGGACCGGGGTTGAGTGCCGGCAGGGTCGAGTAGTAGGTATAAACTTGTCCGGTTTGAGGAGAACTCGATTGGGTAGGCTTAACCGAAGTTTTGAAGTGGGTTCTCTTGTGAATTTGACACTGTTAGAATCGTTTAATGCTTCTGGGTTTGTGCTTAATGGGTCTATTCCTGAGTGGTTGGGTGAGAGACTGAGGGTGTTGGAGGTCCTTGACCTTAGATTTTGTTCTGTAACGGGTTTGATTCCTGAATCAATTGGGGGGTTGAGTGTATTGAGGGTTTTGGTGCTTTCAGGGAATTCACTCACCGGTAGAATGCCTTCAACGCTTGGGAACCTCACAAGGCTTTCTGTTCTTGATCTCTCTGGAAACTCTCTTTTAGAGTCTGTGCCTGATTCTGTGTCTAAACTTAGGAACCTCACAAGGCTTGATCTTTCTAACAATTACTTGTCTGGGTCTGTTCCACCTGAACTGGGCGCCCTTTCGAGTCTTCAAAAGTTGAACCTTTCTGGAAATGCTTTTACTGGGTCGGTTCCCTCTCAACTGGGTAACCTTTCGGAGTTGGTTGGGGTTGATCTTAGTATGAATTTTCTGTCGGGGCAGTTTCCGGATGGTTTGTTTTCCTCTCGGCTCTTGGCCCTTGAGGTTCTCATTCTCAGAGGGAATTCGTTTGATGGTGCTCTTCCTAATAATTTTAAGCCGCCCAGGTTGAACTTTCTTGATGTGTCCAGTAACAACCTCACTGGGACACTGCCGAATTTCGCAAGTTGGAATGATAGCTCTGGTGTTGTGTTCAATTTGTCAAACAATTTGTTCTATGGACTTCTGAACACTTCACTGTACAGATTTAAAACGATGGATTTGTCAAGTAATTATTTGGAAGGTGATGAAGGTGGCGGTAATGTCATTCTAGATAGAAATTGCCTACAGATGACTCCAAACCAGAGGAATTTGGAAGAGTGTAGAGATTTTTATGGTGCAAGAAATTTACCCTTTGCATTCCCAGAATCTAAGTCCGGGAGCCGCAGAAGGGTGGTATTCATACTGGTAGGAATATTTGGTGGGCTTGGCTTTATTGCGGTGCTGACATTGGTCCTCGTGCTGGTTCTAAAACAATGTAAGAATCGTAGAAGTTTGGAAGTTGAAAGGGGGACCAAAGATGAGGGCCCTGTTCAGGCAGGGGAAAGCCCTATACCTCCTAAGGATGTTGATTTTGTGACTGGCGTGGGAGAAGCATTTAGTTCTGAGCACATGCTCCATTTGACTGGCAATTTTGCTGAAGAAAATATCATAAAGTATGGCCATTCCGGGGTCCTCTTCTTGGGAGTCTTGGAAGGTAGAGCAACTGTGGTTGTCAAAAGGATAGACTTGAAACTATTTAAGAGAGAATCATACGTCGTGGAATTGGAACTATTAAGTAAGGTTTCACATGCAAGATTGGTTCCAATCCTGGGCCACTGTCTGGAGAATGAGAATGAGAAATGTATAGTTTACAAATACATGCCAAATAGTGATTTGGCTACGTCTTTGCACAGAGTCACTGGTTCAGATGGTAAATTACAGTCCCTGGATTGGATCACGAGATTGAAAATTGCAATAGGAGCTGCTGAAGGCTTAGCTTACCTACATGAGTGCAGCCCTCCCCTTGTCCACAGAGATGTCCAAGCTAGCAGTATACTTCTTGATGATAAATTTGAAGTGCGACTAGGAAGTTTGAGCCAGGTTACTGCCCAAGGAGATCTTCAACAAGGAGTCATCTCAAGGGTTTTCAGCAAGCCATCAGCTTCTAATGAAGGCGATCCTGGTAAATCATCAGCAACATGCGCCTACGATGTCTACTGTTTCGGGAAGATTTTACTCGAATTGATTACCGGTAACATTGAAGTGAGTAAGTCAGAGGATGCCTCTACAAAAGAGTGGTTAGAGCAAACCTTGCCTTACATCACTCTATACGATAAAGAAAGGGTGACTAAGATTGTTGACCCCCAATTGATCGTGGATGAGGACCTATTGGAAGAGGTATGGGCTATGGCAATTGTGGCCAATGCATGCTTGAATCCCAAGCCATCCAAACGTCCTCCCATGAGACATGTCCTGAAAGCATTGGAAAATCCATTGAAGATTGTGAGAGAAGAAAATACTAGCTCAGAAAAGTTGAGAACAAACTCTTCTAGGAAATCTTGGAGCACTGCGTTCTTTGGTAGCTGGAGACACAGCTCATCGGACAGTGTTGTTGCTGCAACACATACAAACAAAGAGGGTACCAGTGACACTAAAAAATCAAGAGTAGGTTCTCAAAGTAGTGGAAATGATCATTCATCTTCCAATAAAAGGTCATCCAATGAAATTTTCCCTGAACCATTGGAAATGCAAGATGTTGAGACTGGAGAGGCAAGATAA 2565 0.4394 MGEIAVSVVSMLLLMVGLTMGMGLSSRTEWFALRELRSSLGIRAKYWPIKAEPCGNWTGVECRQGRVVGINLSGLRRTRLGRLNRSFEVGSLVNLTLLESFNASGFVLNGSIPEWLGERLRVLEVLDLRFCSVTGLIPESIGGLSVLRVLVLSGNSLTGRMPSTLGNLTRLSVLDLSGNSLLESVPDSVSKLRNLTRLDLSNNYLSGSVPPELGALSSLQKLNLSGNAFTGSVPSQLGNLSELVGVDLSMNFLSGQFPDGLFSSRLLALEVLILRGNSFDGALPNNFKPPRLNFLDVSSNNLTGTLPNFASWNDSSGVVFNLSNNLFYGLLNTSLYRFKTMDLSSNYLEGDEGGGNVILDRNCLQMTPNQRNLEECRDFYGARNLPFAFPESKSGSRRRVVFILVGIFGGLGFIAVLTLVLVLVLKQCKNRRSLEVERGTKDEGPVQAGESPIPPKDVDFVTGVGEAFSSEHMLHLTGNFAEENIIKYGHSGVLFLGVLEGRATVVVKRIDLKLFKRESYVVELELLSKVSHARLVPILGHCLENENEKCIVYKYMPNSDLATSLHRVTGSDGKLQSLDWITRLKIAIGAAEGLAYLHECSPPLVHRDVQASSILLDDKFEVRLGSLSQVTAQGDLQQGVISRVFSKPSASNEGDPGKSSATCAYDVYCFGKILLELITGNIEVSKSEDASTKEWLEQTLPYITLYDKERVTKIVDPQLIVDEDLLEEVWAMAIVANACLNPKPSKRPPMRHVLKALENPLKIVREENTSSEKLRTNSSRKSWSTAFFGSWRHSSSDSVVAATHTNKEGTSDTKKSRVGSQSSGNDHSSSNKRSSNEIFPEPLEMQDVETGEAR 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01907 854 SUPERFAMILY Protein kinase-like (PK-like) 461 757 IPR011009 -
Spst8g01907 854 Pfam Protein tyrosine and serine/threonine kinase 487 756 IPR001245 GO:0004672|GO:0006468
Spst8g01907 854 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 188 767 IPR046959 -
Spst8g01907 854 Pfam Leucine rich repeat 123 181 IPR001611 GO:0005515
Spst8g01907 854 Pfam Leucine rich repeat 182 228 IPR001611 GO:0005515
Spst8g01907 854 Gene3D Transferase(Phosphotransferase) domain 1 556 783 - -
Spst8g01907 854 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 89 185 - -
Spst8g01907 854 FunFam Putative LRR receptor-like serine/threonine-protein kinase 556 777 - -
Spst8g01907 854 FunFam Leucine-rich repeat receptor protein kinase EMS1 186 286 - -
Spst8g01907 854 MobiDBLite consensus disorder prediction 815 837 - -
Spst8g01907 854 Gene3D Ribonuclease Inhibitor 210 354 IPR032675 -
Spst8g01907 854 SUPERFAMILY L domain-like 56 350 - -
Spst8g01907 854 Gene3D Phosphorylase Kinase; domain 1 455 555 - -
Spst8g01907 854 SMART LRR_typ_2 192 215 IPR003591 -
Spst8g01907 854 SMART LRR_typ_2 168 191 IPR003591 -
Spst8g01907 854 SMART LRR_typ_2 120 143 IPR003591 -
Spst8g01907 854 SMART LRR_typ_2 144 167 IPR003591 -
Spst8g01907 854 SMART LRR_typ_2 266 289 IPR003591 -
Spst8g01907 854 SMART LRR_typ_2 216 240 IPR003591 -
Spst8g01907 854 ProSiteProfiles Protein kinase domain profile. 480 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01907 854 MobiDBLite consensus disorder prediction 799 854 - -
Spst8g01907 854 FunFam Predicted protein 451 555 - -
Spst8g01907 854 Gene3D Ribonuclease Inhibitor 26 209 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01907 Spst-Chr8 24249053 24252529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01907 18 648 Miscellaneous Gene Families AT2G16250 48.521 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Spst8g01907 PK_Tyr_Ser-Thr 5.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01907 - - gmx:100798381 1320.06