Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01868 ATGGCATTGTTCCGCAAGTTCTTTTATAAGAAGCCCCCCGATGGGCTTCTAGAAATCACTGAAAGGGTTTATGGTACGCTTTCTGTTGCCTCGTTTTTTGTGAACAAATTGGTTCTGGTGGCAGTGAACAGTGTTGGTTTCTTCTCAGTGCAAATATTTCATTCTTATGCATTTTGCCTTGGTGGGGGTTGTGTCTTTGATTACTGCTTTACCACGGATATTATGGAAGAAGAAGAATATAGAGTGTATATAGGGGGAATAATTGGGCAACTTCGTGGTCACTTCCCTGATGCTTCCTTTATGGTGTTCAACATGCGGGAGGGTGAATGCCAAAGCCAGATTTCAAACATTTTGTGTGACTATGATATGACTGTGATAGACTACCCTCGACAGTATGAAGGTTGTCCATTGCTTACCATGGAGATGATCCACCATTTCTTGAGATCAGGTGAAAACTGGCTTCAACTTGGGCAACAAAATGTTGTCTTGATGCACTGTGAACGAGGTGGGTGGCCGTTATTAGCATTTATGCTAGCTGCACTCTTGATTTACAGAAAGATGTTTACAGGAGAGCAGAAAACACTAGACATGATATACAAGCAAGCTCCTCGGGAACTTCTGCAGTTGATGTCACCATTGAATCCATTACCTTCACAATTGAGATATCTTCAGTACATATCAAGAAGAAATGTTGGTTCAGAATGGCCTCCTCTTGATAGGGCACTGACTTTGGACTGTGTAATTATAAGACTCATTCCTAACATGAGTGGAGAGGGTGGCTGCCGTCCTATATTTAGGATATATGGACAAGACCCTTTTATTCCTGCGGATCGAACCCCCAAAGTTCTCTTCTCAACTCCAAAAAATAGCAAACTTGTCCGCTATTACAAGCAGGTGGTACACAAGAGGGATGGTTTGAGCGGGAAATTGACCGCCTTTGCTCATGAGCAGAATGGAAGAAAACCTGTAGAGCTTTATAGGAGAATACCTGATTTGATCAGTTGGCCGGCGCTGATGAACTCAGCTGATTGTGAGCTGGTTAAGATTGACATCCATTGTCATGTTCAAGGTGATGTTGTTTTTGAGTGTATTCATCTGCACAGTGATTTAGAGCATGAAGAAATGATGTTTCGGGTGATGTTTAATACAGCATTCATAAGGTCAAATATTTTGATGCTTAACCGTGATGAAATTGACATACTATGGAATGCTAAAGATTGCTTCCCTAAAAATTTTAGAGTGGAGGTTCTTTTCTCAGATATGGATGCTTCCTCTTCTGTTATTTCAATTGATCTGCCTCGTGTTGAGGAGAAAGAAGGCCTGCCTATTGAAGCATTTGCTAAGGTCAAGGAAATTTTCAGCAGCGTGGACTGGCTAGATTCAAAGGAAGAGGTAGCAAGTGTGCTCCAACAGATCACGGCATCAAATATCCTTCTGGAAAGATTGGACAGTGGGACAAAGTCTGCAGTCCAGGGGAAGCATTCCACGTCTTCATTGGGATCATATGTGGATGCTGATATGGAAAATAAAACAGAACCATTACAATCAAAGACATTGTCTGAAAATGACATTGAGACTCTCCAATGCTCAGGTGGGCTCTCAAACTATTCAGATTCTACTAAAAAGGATACTGAGTTTACTGCATCTATGGCTCACGAGAATCAGGGGAAAGAATCTGTTCTCTTTATTGAACCATCCACTGATGCTGATTCATTGGAAAAGAAGACTGATTTGTTAGGATCAAAGGACAAAGCGATTGAATCATTCAACTCGGATGCATTTTTGGGAAATGATAGCAGATTCAAATTTGAACCTAGGCCACTTGCAAGAATTGATACAAGACGTTCTACTTCTGAAGTTGAAGGGAAGCCGTCTATGTCCTCGTTTGAATCATCTGGTAGTGCTCCTATGGAAAAGAACAACGACCCTCGAGTATTGCCTGTTGATGCAAACCCAATTAAAACGAAAAGTGAACCTCAAGAAATGCAGATTTCCGTCCAGCTTCCTGCCCAATCTAAAATAATTTCACCCCGGGTGCGTCCAGCTGTTCGATCTGCTTCAGCTTCTTATTTTAACTCCTTACAAGGTTCACCTGTAGCTATCTCAAGATATCGTAGTGCACCATCAGCTCTTGGAATAACATCTGTGTTGCAGGATCATGCACCAGCGGATATCAAAGAAGTAACTCATGCTGTGACAAGATCTCCTCTGCCTTCCACATTGCCTCCTTCAGACTCCAAGGTGTTAAATTCTATAGAGCCTAGTTCCACAAGTGTTCCTCCAGTATCATCATCACCTTTGCCTCCATCTTTGCCATTAAAAACTTCTGTTGATGCTCTTAACACTGTGGAAAAGACTTTTGGATCCTTTTCTCCTGCAGCAGTCAATCCTCCTCCTCCTCCTCCTCCTCCTCCCCCTCCATCACCACTAGCACCTTCTCATACTTCAAATCTGATGCAATCTGATACAATGCACAATGAAGGTCAGAAATCATTGGTTAGTCCTCCTCCCCCTCCTCCCCCACCCCCTTCCATTCCTGAAACATCACTTTCCACAGCCAAAGATTCATGTAAAGGTCCTCCTGCTCCGCCACCACCACCTCCTCCTTGTCCCCCACCTCCACCTCCTAGCCTTTCTGGTTCTACTACATCATCAGTGCCACCACCACCCCCTCCTCCAGCTTCTGCATCACAAACTTTTCCACCTGCACCACCACCTCCACCTCCTAGCCTTTCTGGTTCAACTCCATCACCATTAGCGCCACCACCACCCCCTCCTCCTGGTTCTGCATCCCAAAATTCTTTGTCTAGCTCCACAAATGTTCCACCTGTACCCCCACCTCCCCTTTCTGCCAATGGACTGTCAAAACCTGGAATTCCTGGACCACCTTCTGTTCCTAGGGCACCTGGACCACCTTCTGCTCCTGGACCACCTTCTGCTCCTGGGGCACCTTCTGTTCCTGGACGTGGCCTGTTGCGAGCTAATCCAAAAGGTCAGTCTCAGAGTAAAAGGAGCAATCTGAAACCTTACCATTGGTTAAAATTAACGAGGGCAATGCAAGGAAGCTTATGGGCTGAGACACAGAAACTGGATGAATTTTGTAGGGCTCCAGAGTTTGACATGTCAGAACTTGAGACTTTGTTCTCCGCAGCTGCTCCAGCTTCTGATGATGGAAAAGGAGGAAAATCAAATCGCCGTGGCTCGGGGCAAAAAGTTGAGAAAGTTCAACTGATTGAGCTTAGGCGGGCATATAACTGTGAGATCATGCTTACAAAAGTCAAAATCCCTTTACCTGATTTGATGAGTGCCGTGCTTGCAATGGATGATTCAGTATTGGATGTTGATCAAATTGAGAATCTCATAAAATTCTCACCAACCAAAGAAGAGATGGAAACACTCAAGAACTACACTGGGAATATTGACAACTTGGGAAAGTGTGAGCAGTTCTTCTTAGAATTAATGAAAGTGCCAAGAGTGGAAAGCAAGCTAAGAGTTTTCTCTTTTAAGATGCAATTCTTAGCCCAGGTTTCAGAGCTTAAAAGGGACTTGAATATTGTGAATTCTGCATCTGAAGAGATAAGGAATTCAGTCAAGTTGAAAAGAATCATGCAGACCATTCTTTCTCTGGGTAATGCTTTGAACCATGGAACAGCAAGAGGTTCGGCTGTTGGGTTTCGATTGGATAGTCTCCTTAAACTCACAGATACACGAGCTAGAAATAGCAAGATGACTCTTATGCATTATCTCTGTAAGAAAGATATCGGTTGCTTCTCCAGCATCCATCCCTCTCAGCTTGTTCAGAAGAATTTATGTTCCTTTGGGAATTTGACTCTGGTGCTTTCTGAAAAACTTGGAGAACTTCTAGATTTTCCCAAAGACCTAGTGAGTTTGGAGGCTGCAACTAAGATACAATTAAAATTTTTGGCAGAGGAAATGCAAGCTATTAGTAAAGGACTGGAGAAAGTAGTTCAGGAATTGACAGCATCAGAGAATGATGGACTTGTGTCAGAAAACTTTTGCCAGATTCTGAAGGAATTTCTTTCTTATGCTGAAGCTGAAGTAAGGTCTTTGGCTCAACTTTATGCCAATGTGGGTAGAAATGCAGATGCATTGGCTTTATACTTCGGTGAAGATCCAGCACGTTGCCCATTTGAACAAGGTTTGCACCCTTGTGCAGCATTGTTGCTCCCGTTTGTATCTACGCTGCTCAACTTCGTGAGAATGTTCGTAAAAGCACATGAAGAAAATTGCAAGCAGATTGAACTAGATAAAAAGAGAGCAGAGAAGGAAGCAGAAAATGAGAAGTTGAAGCTAGCTGCTGCTAATAAGGAGTCCGAACAGATGATGAGGACCACAATAAAGAGTGGGAATATTAAATGA 4380 0.432 MALFRKFFYKKPPDGLLEITERVYGTLSVASFFVNKLVLVAVNSVGFFSVQIFHSYAFCLGGGCVFDYCFTTDIMEEEEYRVYIGGIIGQLRGHFPDASFMVFNMREGECQSQISNILCDYDMTVIDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGQQNVVLMHCERGGWPLLAFMLAALLIYRKMFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRLIPNMSGEGGCRPIFRIYGQDPFIPADRTPKVLFSTPKNSKLVRYYKQVVHKRDGLSGKLTAFAHEQNGRKPVELYRRIPDLISWPALMNSADCELVKIDIHCHVQGDVVFECIHLHSDLEHEEMMFRVMFNTAFIRSNILMLNRDEIDILWNAKDCFPKNFRVEVLFSDMDASSSVISIDLPRVEEKEGLPIEAFAKVKEIFSSVDWLDSKEEVASVLQQITASNILLERLDSGTKSAVQGKHSTSSLGSYVDADMENKTEPLQSKTLSENDIETLQCSGGLSNYSDSTKKDTEFTASMAHENQGKESVLFIEPSTDADSLEKKTDLLGSKDKAIESFNSDAFLGNDSRFKFEPRPLARIDTRRSTSEVEGKPSMSSFESSGSAPMEKNNDPRVLPVDANPIKTKSEPQEMQISVQLPAQSKIISPRVRPAVRSASASYFNSLQGSPVAISRYRSAPSALGITSVLQDHAPADIKEVTHAVTRSPLPSTLPPSDSKVLNSIEPSSTSVPPVSSSPLPPSLPLKTSVDALNTVEKTFGSFSPAAVNPPPPPPPPPPPSPLAPSHTSNLMQSDTMHNEGQKSLVSPPPPPPPPPSIPETSLSTAKDSCKGPPAPPPPPPPCPPPPPPSLSGSTTSSVPPPPPPPASASQTFPPAPPPPPPSLSGSTPSPLAPPPPPPPGSASQNSLSSSTNVPPVPPPPLSANGLSKPGIPGPPSVPRAPGPPSAPGPPSAPGAPSVPGRGLLRANPKGQSQSKRSNLKPYHWLKLTRAMQGSLWAETQKLDEFCRAPEFDMSELETLFSAAAPASDDGKGGKSNRRGSGQKVEKVQLIELRRAYNCEIMLTKVKIPLPDLMSAVLAMDDSVLDVDQIENLIKFSPTKEEMETLKNYTGNIDNLGKCEQFFLELMKVPRVESKLRVFSFKMQFLAQVSELKRDLNIVNSASEEIRNSVKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNSKMTLMHYLCKKDIGCFSSIHPSQLVQKNLCSFGNLTLVLSEKLGELLDFPKDLVSLEAATKIQLKFLAEEMQAISKGLEKVVQELTASENDGLVSENFCQILKEFLSYAEAEVRSLAQLYANVGRNADALALYFGEDPARCPFEQGLHPCAALLLPFVSTLLNFVRMFVKAHEENCKQIELDKKRAEKEAENEKLKLAAANKESEQMMRTTIKSGNIK 1459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01868 1459 MobiDBLite consensus disorder prediction 734 1007 - -
Spst8g01868 1459 Coils Coil 1410 1451 - -
Spst8g01868 1459 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 242 421 IPR035892 -
Spst8g01868 1459 MobiDBLite consensus disorder prediction 734 760 - -
Spst8g01868 1459 SMART it6_source 800 1455 IPR015425 -
Spst8g01868 1459 MobiDBLite consensus disorder prediction 769 789 - -
Spst8g01868 1459 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 108 227 IPR029021 -
Spst8g01868 1459 MobiDBLite consensus disorder prediction 620 638 - -
Spst8g01868 1459 MobiDBLite consensus disorder prediction 813 830 - -
Spst8g01868 1459 Gene3D Protein tyrosine phosphatase superfamily 16 231 IPR029021 -
Spst8g01868 1459 PANTHER FORMIN-J 1 927 - -
Spst8g01868 1459 MobiDBLite consensus disorder prediction 940 984 - -
Spst8g01868 1459 MobiDBLite consensus disorder prediction 612 645 - -
Spst8g01868 1459 MobiDBLite consensus disorder prediction 858 930 - -
Spst8g01868 1459 MobiDBLite consensus disorder prediction 1445 1459 - -
Spst8g01868 1459 MobiDBLite consensus disorder prediction 793 812 - -
Spst8g01868 1459 Pfam C2 domain of PTEN tumour-suppressor protein 240 419 IPR014020 -
Spst8g01868 1459 Gene3D - 336 424 - -
Spst8g01868 1459 Gene3D - 236 304 - -
Spst8g01868 1459 MobiDBLite consensus disorder prediction 832 847 - -
Spst8g01868 1459 MobiDBLite consensus disorder prediction 1438 1459 - -
Spst8g01868 1459 ProSiteProfiles Formin homology-2 (FH2) domain profile. 997 1435 IPR015425 -
Spst8g01868 1459 Pfam Formin Homology 2 Domain 999 1386 IPR015425 -
Spst8g01868 1459 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1073 1435 - -
Spst8g01868 1459 ProSiteProfiles C2 tensin-type domain profile. 239 421 IPR014020 -
Spst8g01868 1459 MobiDBLite consensus disorder prediction 1050 1071 - -
Spst8g01868 1459 Gene3D Formin, FH2 domain 992 1420 IPR042201 -
Spst8g01868 1459 SMART PTEN_C2_2 237 420 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01868 Spst-Chr8 23062652 23078326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01868 1 486 FH2 protein (formin) Gene Family AT2G25050 59.138 0.0 604