Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01863 ATGGAACCAACATGTTTGGATACTTCACTCAATCTCAACGCTCATCCTTCTTCTGTGCACACGGATGGGGTTTTGGTGGAAGAGTTGCGTCGACTGAGTTGTGAGAACAAGAGGTTGACTGAGATGTTGACACACTTGTGTGACAACTACATGGCTCTGCAGAAGCAATTAACCCAATTGATCAACACAAATTTTGAGCACGACCCAGTTGAATCACGCAAGAGAAAAGCAGAGGGTGAATGTTGTACCAACAAATTTGGTGTTGTTAACAACAGTAATGGTGATTCCAGCTCCATCACAGAGGATTCGTTAAAAAGGTACAAGGATTTCAACTCCTCCCCCAAGGTTTCCAAGGTTCTTGTCAAGACCGAAGCCTCCAACAATAGCTTATATGTGATGGATGGATATCAATGGAGGAAATATGGTCAAAAGGTCACTAGAGATAACCCTTCTCCTAGAGCTTACTTTAGGTGCTCCTTTGCCCCAACCTGCCCTGTTAAAAAGAAGGTGCAAAGAAGTTTAGAAGACCCTACCATACTTGTAACAACATATGAAGGAGAGCATAACCATGGTCATCAAAGAGGTGAAATATCACTTGTTTCAAACCAGAGTGAAGGCCCTAAAGGGTCAAGTCCTGTTTCCTCACCAACACCCTCAATTCCAAGTGCTTGCCCCACTCTAATGCTTGATATGGTCAAATCAGGATTGGTTGAAAGTGCCCAAAAGTCATCTGTCCAACAATTTTTGGTTCAACAAATGGCTTCTTCTCTGACAAGGGACCCCAATTTCACCACAGCACTTGCCACTGCCATTTCAGGAAAAATTCTAGGGGCCAAATGGTGA 843 0.4353 MEPTCLDTSLNLNAHPSSVHTDGVLVEELRRLSCENKRLTEMLTHLCDNYMALQKQLTQLINTNFEHDPVESRKRKAEGECCTNKFGVVNNSNGDSSSITEDSLKRYKDFNSSPKVSKVLVKTEASNNSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSFAPTCPVKKKVQRSLEDPTILVTTYEGEHNHGHQRGEISLVSNQSEGPKGSSPVSSPTPSIPSACPTLMLDMVKSGLVESAQKSSVQQFLVQQMASSLTRDPNFTTALATAISGKILGAKW 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01863 280 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 24 275 IPR044810 GO:0003700
Spst8g01863 280 MobiDBLite consensus disorder prediction 200 219 - -
Spst8g01863 280 SMART WRKY_cls 132 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst8g01863 280 Pfam WRKY DNA -binding domain 134 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst8g01863 280 SUPERFAMILY WRKY DNA-binding domain 130 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst8g01863 280 Gene3D WRKY domain 115 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst8g01863 280 ProSiteProfiles WRKY domain profile. 127 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01863 Spst-Chr8 22928496 22929665 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01863 6 275 WRKY Transcription Factor Family AT1G80840 45.993 6.49e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst8g01863 WRKY 6.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01863 - - gmx:100810978 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01863 8 22928496 22929665 Spst9g00711 9 6066058 6067275 PCT