Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01832 ATGTCCAAGATGCTGGCCCTCTTGCTCATGATTGGAGCAATGTTGTTTACAGTAGGAGCTGAGCCAGTGGAAGATAAACAAGCATTGCTTGATTTCCTTCACAACATTAACCACTCTCGTAATCTGATCAACTGGGATAAGAATTCTTCCGTGTGCAAAAGGTGGACTGGAGTCACCTGCAACTCTGAGCAATCACAGGTTATAGCCCTCCAACTGACCAGAACTGGATTGAGTGGTCTAATCCCACCCAACACTCTCAGCCGTCTCTCAGCACTTCAAACTCTGAGTCTTGCATCAAATAGCATAACTGGTTCTTTCCCTTCTGGTTTCTCTCAGCTAAAGAATTTGATCTATCTGTATCTCCAATTCAACAAATTTTCTGGTCCTTTGCCGTCAGACTTTTCAGTTTGGAAGAATCTTAGTATTGTGAATTTATCCAACAATTCTTTCAATGGGAGCATTTCATTTTCACTTTCAAATTTGACTCATCTCTCTTCTTTAGTACTATCCAACAACTCCCTTTCAGGTGACATTCCTGATCTCAATATCCCTACCCTGCAAGAGCTGAATTTTGCGAACAATAACCTTAGAGGGGTTGTGCCTGAATCCCTTGAGAGATTTCCAAGTGGGGCATTTGCTGGTAACAATCTAACTTCTTCACATGCACTTTCTCCTTCTTTTCTTGTTCAGCCCCCAAATCCTCATCCAATAAGGAAAAAATCCAAAGGACTTAGGGAACCAGCATTGTTGGGTATCATTATTGGTGCTTGTGTGCTGGGAATCGCAGTAATAGCAGCTTTTGTGATTGTGTGCCGCTATGAGAAAGGTGGTACAAATGGACAACAAGTGAAGTCTCAGAAAAGAGACGTATCCAGGAAAAAAGAAGGTTCTGAAAGTCGAGACAAGAACAAAATTGTTTTCTTTGAGGGTTGCAATCTTGCATTTGACTTGGAGGACTTGTTGAGAGCATCTGCTGAGGTTCTTGGAAAGGGCACGTTCGGGACAGTGTACAAGGCTGCTCTAGAAGATGCAACAACCGTGGCAGTGAAAAGGTTGAAGGATGTCACGGTTGGAAAACGCGAGTTTGAACAACAGATGGAGATGGTGGGAAGGATTAGGCACGATAATGTGGTTGCATTAAGGGCATATTACTATTCAAAGGAGGAGAAACTTATGGTATATGATTACTACGAGCAGGGCAGTGTGTCTTCAATGTTGCATGGCAAAAGAGGAGGCAGAAATTCTTTAGACTGGGATAGCCGTTTGAAAATAGCAATTGGTGTAGCAAGAGGCATTGCTCACATCCATGCTCAACAAGGAGGGAAACTCCTCCATGGAAACATAAAGGCCTCTAACATCTTCCTCAACTCCCAAGGATATGGTTGTCTCTCTGACATTGGTCTTGCAACACTCATGAATCCAGCATTGAGAACAACAGGGTACCGTGCACCTGAAGCAACCGACACACGAAAATCAATGCCGGCCTCTGATGTCTACAGTTTTGGTGTGCTGCTGCTTGAGCTTCTAACTGGGAGGTCTCCCTTACATGCCAAAGGAGGTGAAGAAGTTGTCCACTTGGTTAGATGGGTGAATTCTGTGGTTAGAGAGGAGTGGACTGCAGAAGTGTTTGATGTGGAGTTGCTGAGGTATCCAAATATTGAGGAGGAAATGGTTGAGATGCTACAAATAGGGATGGCATGTGTTGTGAGATCACCATATGAGAGGCCAAAAATTGGCGAGGTGGTGAGAATGGTGGAGGAAATTCGTAGAGTAAATACTGAAAATAGATCATCCACTGAATCTAGATCAGAAGGTTCCACTCCAACCCCTCATGCAATTGAGACACCTTCTACCTCTTTTGCTCATTGA 1869 0.4366 MSKMLALLLMIGAMLFTVGAEPVEDKQALLDFLHNINHSRNLINWDKNSSVCKRWTGVTCNSEQSQVIALQLTRTGLSGLIPPNTLSRLSALQTLSLASNSITGSFPSGFSQLKNLIYLYLQFNKFSGPLPSDFSVWKNLSIVNLSNNSFNGSISFSLSNLTHLSSLVLSNNSLSGDIPDLNIPTLQELNFANNNLRGVVPESLERFPSGAFAGNNLTSSHALSPSFLVQPPNPHPIRKKSKGLREPALLGIIIGACVLGIAVIAAFVIVCRYEKGGTNGQQVKSQKRDVSRKKEGSESRDKNKIVFFEGCNLAFDLEDLLRASAEVLGKGTFGTVYKAALEDATTVAVKRLKDVTVGKREFEQQMEMVGRIRHDNVVALRAYYYSKEEKLMVYDYYEQGSVSSMLHGKRGGRNSLDWDSRLKIAIGVARGIAHIHAQQGGKLLHGNIKASNIFLNSQGYGCLSDIGLATLMNPALRTTGYRAPEATDTRKSMPASDVYSFGVLLLELLTGRSPLHAKGGEEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIGMACVVRSPYERPKIGEVVRMVEEIRRVNTENRSSTESRSEGSTPTPHAIETPSTSFAH 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01832 622 CDD STKc_IRAK 328 588 - -
Spst8g01832 622 ProSiteProfiles Protein kinase domain profile. 322 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01832 622 SUPERFAMILY Protein kinase-like (PK-like) 326 586 IPR011009 -
Spst8g01832 622 Gene3D Phosphorylase Kinase; domain 1 287 396 - -
Spst8g01832 622 FunFam pollen receptor-like kinase 1 291 396 - -
Spst8g01832 622 MobiDBLite consensus disorder prediction 592 622 - -
Spst8g01832 622 PANTHER OS05G0588300 PROTEIN 8 598 - -
Spst8g01832 622 MobiDBLite consensus disorder prediction 598 622 - -
Spst8g01832 622 Pfam Leucine rich repeat 70 126 IPR001611 GO:0005515
Spst8g01832 622 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Spst8g01832 622 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 397 600 - -
Spst8g01832 622 Gene3D Transferase(Phosphotransferase) domain 1 397 608 - -
Spst8g01832 622 SUPERFAMILY L domain-like 37 207 - -
Spst8g01832 622 ProSitePatterns Protein kinases ATP-binding region signature. 328 359 IPR017441 GO:0005524
Spst8g01832 622 FunFam Probable inactive receptor kinase RLK902 22 182 - -
Spst8g01832 622 Gene3D Ribonuclease Inhibitor 22 233 IPR032675 -
Spst8g01832 622 Pfam Protein kinase domain 325 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01832 Spst-Chr8 22122890 22125442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01832 14 613 Receptor kinase-like Gene Family AT4G23740 55.183 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst8g01832 Pkinase 1.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01832 - - gmx:100810095 1015.76