Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01819 ATGGAAGTGGAAGGGCCTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAAAAAAGCATACATGGAACCAAGTATCCAAGATGCGCCCAGAGAAATGTTCAAGGCTGCATGGCCACAAAGCAGGTGCAAAGATCTGAGCAAGACCCAACTGTCATTGTAATCAATTACCGTGGAAATCACACCTGCATAATGGTTTCCTCTGCGGTTCTTCCATCTGGTTCCCAGGAAAACAAAGAACCAAATTTGAGCATAATTCCACAGCAGCAAAGTGCTGAGCAGAAACCAAGTGATCTACTTATGAACCTCCGCGCAGGACTGAGAGTCCTAACTGAGAATCTGGACCAACCATCACTTGCTTCATCGTTCCACTATTTCCCTTCAACTTCAACTGAAAAAATGGAAGATCAAGTTTTCTCTTCCATAATGATTGACAACAACTTTGCAGAAAATCTCACTTGTCCTTCTTATGTGTCCCCTGCCGCATCTGACACAACCTACCTTTCGGCTTCTCCAAGCGGAGGAAACAGCTTTAGAGGGCATCCAAATGTGGCAAGTTTTGGAACTGAGATCAATGACATGATTTCACCCGTTACATCTGCTGCTAATTCTCCAACATTTGCAAGCTTGAACTTCCCATTTGATCAGTTTCATATATTAGATAGCCAAAACTTCACCTTTCATAACCCACCATTCCCCTAA 702 0.4316 MEVEGPLDDGYSWRKYGQKSIHGTKYPRCAQRNVQGCMATKQVQRSEQDPTVIVINYRGNHTCIMVSSAVLPSGSQENKEPNLSIIPQQQSAEQKPSDLLMNLRAGLRVLTENLDQPSLASSFHYFPSTSTEKMEDQVFSSIMIDNNFAENLTCPSYVSPAASDTTYLSASPSGGNSFRGHPNVASFGTEINDMISPVTSAANSPTFASLNFPFDQFHILDSQNFTFHNPPFP 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01819 233 SUPERFAMILY WRKY DNA-binding domain 6 63 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst8g01819 233 Gene3D WRKY domain 1 65 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst8g01819 233 SMART WRKY_cls 7 65 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst8g01819 233 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 138 IPR044810 GO:0003700
Spst8g01819 233 ProSiteProfiles WRKY domain profile. 2 61 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst8g01819 233 Pfam WRKY DNA -binding domain 8 63 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01819 Spst-Chr8 22019174 22020009 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01819 3 123 WRKY Transcription Factor Family AT4G23810 44.800 1.27e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst8g01819 WRKY 1.1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01819 - - ccaj:109795434 291.582