Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01810 ATGGAATGCAACAAGGATGAGGCAGCAAGGGCCAAAGATATAGCAGAGAGGAAATTTTTTGATAAAGAATATGCTGGTGCGAAAAAGTTTGCTCTCAAGGCTCTAAATCTGTTTCCTACACTGGAGGGTCTTTCTCAGTTTCTAACAACTCTTGATATTTATATCTCTGCTGAGAATAAAATAAATGGAGAAATGGATTGGTATGGTATACTTGGAGTGTATCCATTTGCTGATGAAGAGACAGTTAGGAAGCAGTACAGAAAGCTGGCTCTCAATCTTCACCCTGACAAAAACAAGTCTCCAGGTGCAGAAGGTGCATTTAAGCTTGTTTCAGAGGCTTGGAGTTTACTGTCAGACAAGGTCAAAAGATTAGCATATAATCAAAACAGGAGATTGGAAGGATTTCAGCATAATGCTCCCAACCATGTTGGGACACAATCAGAAGCACCCAGTTCAAATGGTTTTTATAATCTTAACAAGAATACTACTTCAAGTGCGAGAACTGGAAAAAATAATACTCGGGCACGTCCAACCTCCATTCCTCCACATAAAAATGCTACCTTTTGGACTATCTGTAGTGGTTGCCAGACACATTATGAGTATCTCAGGATATATTTGAATCAAACCCTTTTATGTCCCAATTGCAAACAAGCTTTTGTGGCTGTAGAGAAGGCTCCACCTACCAATCTTTTTGAATCCTCTAATTGGTCTTCTCAGCAAGATCCTCATAAGTCTTCTTGGCAGCACTCCAATGTTGGAAGGAGTGACCCTGTGAATCCAGGAAGAACTAGTACAGTTTCGCACAATTTACATTCCAGCAGTCCTTTGGGCACATCTTTTAATAACACAAATTTCCAGTGGGGTCCTCACTCACAAAAGGGTGGTTTTGTTAGAAAAGATGGATCATCAGCTTCTGCTTCAAATGTTAAGCAAAAGTCAAGTGACTCAAGAAGAGAATGCGAGCAAGGCGAGAAACCTTTGAAGAAAATGAGGGCAGGTGATACGCACATGTATAATACAAATCACATGACCATGAGTGATGGATCAAGCAGTTTGGGCCGTTTTTATGAATCAGGAAAAGCTAAGCATTACAGCATGAGAGAGTTGTCACTGTTTGAATTACGGAATATGTTGATTGCCAAGGCCCAGATTGAAATTCGCCATAAACTTCAAGATTGGCGATCAACGCCCCAAGCTAAGATTACAAACAAGGACAAAGGAAACATGAGACAGAGAAGCACATTCTATGACAAAACATGTCCTGAGAAGCATGGAGGTTCTGCACTTAATGGTAACCGACATGTTGACAGTGATTCTATCGTAGTCAAATCTGATGATACTGTAAAGGAAAAACCAGCCTTTGTTACAATCAACGTTCCAGATCCTGATTTTCACAATTTTGACTTGGATAGAACTGAAAATTCTTTTGGGGAGGACCAGGTATGGGCTGCTTATGATGATGACGATGGAATGCCTCGCTATTATGCTAGAATACACAAGGTGATTTCTACAAAACCATTTAGAATGAGGATCAGTTGGCTTAACTCTCGAAGCAATGACGAATTGGGCCCAATAGATTGGGTAGGTTCTGGTTTTTATAAAACCTGTGGGGATTTCAGGACTGGCAGGCATGAATTGACCGATTCTTTAAATTCCTTTTCACATAAGGTAAGGTGGACAAAGGGCACCAGAGGAGTTGTTCGCATCTTTCCTGGCAAGGGGGATGTCTGGGCTCTCTATAGAAACTGGTCTCCTGATTGGAATGAAAATACTCCAGATGAAGTGATACACAAGTATGATATGGTGGAAGTGCTTGAAGATTCCAATGAAGAAGGTGTATTGGTCACACCACTTGTTAAAGTTGATGGTTTTAGGACAGTGTTTCACAGGCACAGCCATGGTCAGGCAAGAAAAGTTCCTAAAGTGGAGTTGTTTAGATTCTCTCATCAGGTTCCTAATTACTTACTTACTGGGCAAGAAGCTCATAATGCTCCAAAGGGCTGTCAAGATTTGGATCCAGCAGCTACTCCTTTAGACCTCCTTCAGACAACAGATGAAGCTAACGAGGAATTGGATAATGTTGGAAAATCGAAGGAAGACACTTTTCTCGGATCACCTATAAAACATGCTGCTGATTAG 2139 0.41 MECNKDEAARAKDIAERKFFDKEYAGAKKFALKALNLFPTLEGLSQFLTTLDIYISAENKINGEMDWYGILGVYPFADEETVRKQYRKLALNLHPDKNKSPGAEGAFKLVSEAWSLLSDKVKRLAYNQNRRLEGFQHNAPNHVGTQSEAPSSNGFYNLNKNTTSSARTGKNNTRARPTSIPPHKNATFWTICSGCQTHYEYLRIYLNQTLLCPNCKQAFVAVEKAPPTNLFESSNWSSQQDPHKSSWQHSNVGRSDPVNPGRTSTVSHNLHSSSPLGTSFNNTNFQWGPHSQKGGFVRKDGSSASASNVKQKSSDSRRECEQGEKPLKKMRAGDTHMYNTNHMTMSDGSSSLGRFYESGKAKHYSMRELSLFELRNMLIAKAQIEIRHKLQDWRSTPQAKITNKDKGNMRQRSTFYDKTCPEKHGGSALNGNRHVDSDSIVVKSDDTVKEKPAFVTINVPDPDFHNFDLDRTENSFGEDQVWAAYDDDDGMPRYYARIHKVISTKPFRMRISWLNSRSNDELGPIDWVGSGFYKTCGDFRTGRHELTDSLNSFSHKVRWTKGTRGVVRIFPGKGDVWALYRNWSPDWNENTPDEVIHKYDMVEVLEDSNEEGVLVTPLVKVDGFRTVFHRHSHGQARKVPKVELFRFSHQVPNYLLTGQEAHNAPKGCQDLDPAATPLDLLQTTDEANEELDNVGKSKEDTFLGSPIKHAAD 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01810 712 MobiDBLite consensus disorder prediction 231 290 - -
Spst8g01810 712 MobiDBLite consensus disorder prediction 689 705 - -
Spst8g01810 712 SUPERFAMILY Chaperone J-domain 58 126 IPR036869 -
Spst8g01810 712 Pfam DnaJ domain 66 127 IPR001623 -
Spst8g01810 712 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Spst8g01810 712 Pfam Domain of unknown function (DUF3444) 456 660 IPR024593 -
Spst8g01810 712 MobiDBLite consensus disorder prediction 689 712 - -
Spst8g01810 712 Gene3D DnaJ domain 63 175 IPR036869 -
Spst8g01810 712 MobiDBLite consensus disorder prediction 312 328 - -
Spst8g01810 712 MobiDBLite consensus disorder prediction 231 328 - -
Spst8g01810 712 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Spst8g01810 712 CDD DnaJ 66 119 IPR001623 -
Spst8g01810 712 PANTHER BNAC03G44070D PROTEIN 1 677 - -
Spst8g01810 712 MobiDBLite consensus disorder prediction 137 179 - -
Spst8g01810 712 PRINTS DnaJ domain signature 86 101 IPR001623 -
Spst8g01810 712 PRINTS DnaJ domain signature 102 122 IPR001623 -
Spst8g01810 712 PRINTS DnaJ domain signature 68 86 IPR001623 -
Spst8g01810 712 SMART dnaj_3 65 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01810 Spst-Chr8 21903156 21905294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01810 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.759 3.70e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01810 - - gmx:100792212 1141.72