Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01809 ATGGTATGCAGGAGTGGTGTAAGGTCTGTGGTTGTTCATGCTGGAACCTTTGCCAACAGAGTGAAAATCAACGGATTTGGGAGGAGTTTGCGGTTAGTTCGGGGTTTTTCTTATTGGCCGATTCGTGAATATAACACAAACACAGGGATGATGGTTGATACGGGTTCTGTGTCAAGGGCCGCACCTATTATTGATATGATGCCTGAGAAAGATGATGATGGTCGGTTTGGCAGTGGAGGGTGGAAAAGTGAAGATGGAAGACTTAGCTGTGGGTATTCAAGTTTTAGGGGGAAGAGAGTGACGATGGAGGATTTTTATGATATTAAGACATTGAAGATTGGCGGAAAATCAATATGCTTATTTGGAATATTTGATGGTCATGGTGGTTCCCGAGCTGCTGAGTATTTAAAGGAGCATCTCTTTGATAATCTCTTGAAGCATCCAAAATTTTTGACAGATGCCAAATTGGCTATAAGTGAAACTTATAAACAGACTGATGCTAATTTTCTGGATTCTGAAAAAGACACCTACAGGGATGATGGATCTACAGCTTCTACAGCTGTCTTGGTTGATAACCATCTTTTTGTAGCTAATGTTGGAGATTCTAGGACCATAGTATCCAAAGCTGGTAAAGCAATTGCTCTCTCTGAGGATCATAAGCCAAATAGAAGTGATGAGCGGAAGAGAATTGAGAATGCCGGTGGTGTTGTCATGTGGGCAGGTACTTGGAGGGTAGGAGGGGTACTAGCAATGTCTCGTGCCTTTGGTAACCGTATGTTGAAGCAGTTTGTTGTAGCAGAACCTGAGATCCAGGACCAGCAGATAGATGAACAAATTGAACTGCTTATTCTTGCCAGTGATGGACTCTGGGATGTAGTACAGAATGATGATGCTGTTTCTCTTGCGCGCACAGAAGAGGAGCCTGAGGCAGCTGCTCGGAAGTTAACAGAAGCAGCATTTGCCCGTGGGAGTGCAGATAACATTACATGCATTGTGGTGCGCTTCCATCATGACAAGGAGGACTTAGCTAAACGTCCCAAACAAGACGTAGCTAAACCTGACAAAGCAGACCTTGATAAACCTAAAGAAGACGTAGCTAAACCTGACAAAGCAGTATCAGCTAGTGCTCAGCATGAGTAG 1140 0.4377 MVCRSGVRSVVVHAGTFANRVKINGFGRSLRLVRGFSYWPIREYNTNTGMMVDTGSVSRAAPIIDMMPEKDDDGRFGSGGWKSEDGRLSCGYSSFRGKRVTMEDFYDIKTLKIGGKSICLFGIFDGHGGSRAAEYLKEHLFDNLLKHPKFLTDAKLAISETYKQTDANFLDSEKDTYRDDGSTASTAVLVDNHLFVANVGDSRTIVSKAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDQQIDEQIELLILASDGLWDVVQNDDAVSLARTEEEPEAAARKLTEAAFARGSADNITCIVVRFHHDKEDLAKRPKQDVAKPDKADLDKPKEDVAKPDKAVSASAQHE 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01809 379 CDD PP2Cc 89 335 IPR001932 -
Spst8g01809 379 MobiDBLite consensus disorder prediction 342 369 - -
Spst8g01809 379 FunFam Probable protein phosphatase 2C 76 81 341 - -
Spst8g01809 379 SMART PP2C_4 79 333 IPR001932 -
Spst8g01809 379 PANTHER PROTEIN PHOSPHATASE 77 335 IPR015655 GO:0004722|GO:0006470
Spst8g01809 379 ProSiteProfiles PPM-type phosphatase domain profile. 89 335 IPR001932 -
Spst8g01809 379 SUPERFAMILY PP2C-like 85 337 IPR036457 -
Spst8g01809 379 SMART PP2C_SIG_2 87 335 IPR001932 -
Spst8g01809 379 MobiDBLite consensus disorder prediction 342 379 - -
Spst8g01809 379 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Spst8g01809 379 Pfam Protein phosphatase 2C 91 328 IPR001932 -
Spst8g01809 379 Gene3D - 80 366 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01809 Spst-Chr8 21891705 21900576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01809 1 344 PP2C-type Phosphatase Gene Family AT5G53140 69.663 2.08e-179 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01809 K17506 - gmx:100813138 627.476