Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01792 ATGCCTGAACTTCGAACCCGAAGAAACCGGGCAACGTTCCATGACCCAAACCCGAACCCGAACACCCAGAACCGCCAGAGGAGAACTCGAAGAACCACTCTCAACTCCGGCAGGAACAATCGCAACACGCTCGCACGTTGTGGAATCGGTAACCGCGAATTAGAAGAGAAGGAACAACGACAACAACAACAACAACACGTGCCTCTGCTTAGGGTTTCCGTTAAGGAAAAAGAGAAAGTGATGGATGACGAGTACGACAGCGGCGGTGGCCGGAGCGCCGACAAGGCTACTCCCGCCGAAGACGAAGGAAGCACTGCTCCCATTCCCGAGAGGATACAGGTAGGTGGTTCTCCGTTGTACAGATTAGACAGAAAACTTGGGAAGGGAGGGTTTGGACAGGTTTACGTAGGTAGGAGAGTTGGTGCTGGTGCCGGAGCGTTAGAGGTAGCTTTGAAGTTTGAACATAGAAGCAGTAAGGGGTGCAATTATGGACCTCCATATGAGTGGCAAGTTTACAATGCATTGGGTGGTAGTCATGGTGTTCCACGTGTTCATTACAAGGGACGGCAAGGTGATTACTATGTTATGGTTATGGATATGCTTGGCCCTAGTCTGTGGGATGTCTGGAATAACAACTCAAACACGATGTCTGCGGAAATGGTGGCATGTATAGCAATTGAGGCTATCTCCATTTTAGAGAAGATGCATTCTAGAGGATATGTGCATGGTGATGTAAAACCTGAGAATTTTTTGCTTGGCACCCCGGGAACTGCTGACGAGAAAAAGCTTTTCCTGGTTGATCTTGGATTAGCAACCCGATGGCGGGATAGTTCGACTGGCCTTCATGTTGAGTATGATCAACGACCAGACGTATTTAGGGGAACAGTTCGTTATGCTAGTGTGCATGCTCATCTTGGTAGAACAGGGAGCAGGAGGGATGATTTGGAATCTCTTGCTTACACGTTAATTTTCCTTCTTCGTGGTCGGTTACCTTGGCAAGGATTCCAGGGAGAAAATAAAGGATTCCTTGTCTGCAAGAAAAAGATGGCGACCTCACCAGAAGCTTTGTGTTGTGTCTGTCCTCCACCTTTTCGGCAGTTTGTGGAGTATGTAGTGAATTTGAAGTTTGACGAAGAGCCGAATTATGCTAAGTATATATCACTTTTTGATGGAATTGTTGGTCCAAATCCGGACTTCAGGCCCATAAACACTGATGGTGCACAGAAGCTTATATATTTGGTTGGACATAAGAGAGGACGATTGACTGTGGAAGAAGATGATGATGAACAACCAAAGAAGAAAGTCAGAATGGGAATGCCAGCAATGCAATGGATTAGTGTGTACAATGCCCGCCGACCAATGAAGCAAAGGTACCATTACAATGTTGCTGATGTGCGGCTGTCCCAACACATTGAAAAGGGACATGAGGATGGGTTATTTATCAGCAGTGTAGCTTGTTGTTCTAACCTTTGGGCACTTATTATGGATGCTGGCACTGGTTTCACTGCACAAGTTCATGAACTCTCACCCCACTTTCTTCACAAGGAATGGATTATGGAACAGTGGGAAAATAGTTATTACATAAGTGCCATAGCAGGATCTAACAATGGGAGCTCATTGGTTGTAATGTCTAAAGGGACCCAATATGTGCAGCAATCCTATAAAGTCAGTGAGTCATTTCCATTCAAGTGGATCAATAAAAAGTGGAGAGAAGGATTTTATGTCACTGCTATGGCCACTGCTGGGAGTAGATGGGCAATTGTTATGTCCCGTGGTGCTGGATATTCGGACCAGGTTGTGGAACTTGATTTCCTGTATCCTAGTGAAGGCATTCATCGCAGGTGGGACAATGGTTACCGCATCACTTCAACTGCAGCTACATGGGACCAAGCTGCTTTTGTTCTTAGTGTCCCAAGAAGAAAACCGGCTGATGAAACTCAAGAGACACTTCGCACATCTGCCTTTCCTAGTACTCATGTTAAGGAAAAATGGTCAAAAAATCTCTATATTGCATCAATATGCTATGGGAGAACAGTTTCATGA 2043 0.4572 MPELRTRRNRATFHDPNPNPNTQNRQRRTRRTTLNSGRNNRNTLARCGIGNRELEEKEQRQQQQQHVPLLRVSVKEKEKVMDDEYDSGGGRSADKATPAEDEGSTAPIPERIQVGGSPLYRLDRKLGKGGFGQVYVGRRVGAGAGALEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSNTMSAEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGTPGTADEKKLFLVDLGLATRWRDSSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGFQGENKGFLVCKKKMATSPEALCCVCPPPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDFRPINTDGAQKLIYLVGHKRGRLTVEEDDDEQPKKKVRMGMPAMQWISVYNARRPMKQRYHYNVADVRLSQHIEKGHEDGLFISSVACCSNLWALIMDAGTGFTAQVHELSPHFLHKEWIMEQWENSYYISAIAGSNNGSSLVVMSKGTQYVQQSYKVSESFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGYSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVS 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01792 680 CDD STKc_CK1 120 389 - -
Spst8g01792 680 PANTHER CASEIN KINASE-RELATED 113 650 - -
Spst8g01792 680 SUPERFAMILY Protein kinase-like (PK-like) 120 396 IPR011009 -
Spst8g01792 680 ProSitePatterns Protein kinases ATP-binding region signature. 126 152 IPR017441 GO:0005524
Spst8g01792 680 MobiDBLite consensus disorder prediction 13 46 - -
Spst8g01792 680 Gene3D Transferase(Phosphotransferase) domain 1 91 410 - -
Spst8g01792 680 MobiDBLite consensus disorder prediction 71 98 - -
Spst8g01792 680 SMART serkin_6 120 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01792 680 Pfam Protein kinase domain 120 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01792 680 FunFam casein kinase 1-like protein HD16 93 436 - -
Spst8g01792 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Spst8g01792 680 MobiDBLite consensus disorder prediction 1 112 - -
Spst8g01792 680 ProSiteProfiles Protein kinase domain profile. 120 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01792 Spst-Chr8 21588994 21593390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01792 119 275 EF-hand Containing Proteins AT2G17290 30.675 7.66e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Spst8g01792 Pkinase 1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01792 - - zju:107420390 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00952 9 8441191 8445694 Spst8g01792 8 21588994 21593390 PCT