Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01766 ATGGAGGCCAAGTTGGGCGGCGGCGTTATGGCGGCGACCTTTGACGACATCAATTGGAACTCCTTAATGTTCGATCACGACATAAACGACGACGTCAAACCGTGCAAGCTCGATCCCTTCACAATCACCTCTGGTCACCTCAACGACGTTTTCCAAAATCTGGCTTTGCTTTTGGCTGGTGGAGGTGAAGATGCAGTAACTGCATTTTCAACTTGTGGTGGAGTAACAGATGGAACCCTTGTCCACTCCCAAAACCTCACTCCCATCAAATCCACCATCTCCACTATTGATTCTCAGTCTTCAATTTGTGGTACCGTTGGGAGTCCAATGTCTGCAAACAAACCAAATGGAAGAGATAATGAAGTGAAAGGGGCGACGACAACAAGTGGTTCCTCGCGTGAGCAATCTGATGAAGATGATGAAGCAGGTCCTTGTGAACAAAGCACAAACGCTATTGACACCAAGCGTCTTAGAAGGAAGGCTTCTAACAGAGAGTCTGCAAGGAGATCCAGAAAAAGAAAACAAGCCCATTTGGCTGACCTGGAGTGGCAAGTTGAACGGCTGAGGCAGGAAAACTCAAACCTATTCAAGCAGCTTAGAGACGCAAGCCAACAATTTTGTGATGCCGATACCAACAACCGAGTGCTAAAATCAGATGTGGAAGCTTTAAGAGCTAAGGTGAAGTTAGCTGAGGACATGGTGACTAGGGGTACAATGACCTCTTTCAACAACCAGATTCTTCCAAACCAGAGCCAACTAAGCACCCCTCCACCTCTCAACACCAATAATAATCTGCGTCGCATGGCACATGTATCACCAACCATCACTGTGCATGGGAATGATGGTGCTTCATATGGTGGTGGAATCACAGTTAGTGGACAAAACTCACCTCTCGAGCTTGGAAATTTAGATATACCTTGCAGTGATTTCAACAGTGATAATGCTGTGAGCTCTATGACTAGCATGTGGGCTTAG 975 0.4656 MEAKLGGGVMAATFDDINWNSLMFDHDINDDVKPCKLDPFTITSGHLNDVFQNLALLLAGGGEDAVTAFSTCGGVTDGTLVHSQNLTPIKSTISTIDSQSSICGTVGSPMSANKPNGRDNEVKGATTTSGSSREQSDEDDEAGPCEQSTNAIDTKRLRRKASNRESARRSRKRKQAHLADLEWQVERLRQENSNLFKQLRDASQQFCDADTNNRVLKSDVEALRAKVKLAEDMVTRGTMTSFNNQILPNQSQLSTPPPLNTNNNLRRMAHVSPTITVHGNDGASYGGGITVSGQNSPLELGNLDIPCSDFNSDNAVSSMTSMWA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01766 324 MobiDBLite consensus disorder prediction 104 176 - -
Spst8g01766 324 MobiDBLite consensus disorder prediction 104 132 - -
Spst8g01766 324 FunFam BZIP transcription factor 153 204 - -
Spst8g01766 324 Pfam bZIP transcription factor 154 200 IPR004827 GO:0003700|GO:0006355
Spst8g01766 324 PANTHER BASIC LEUCINE ZIPPER 63 81 315 - -
Spst8g01766 324 CDD bZIP_plant_GBF1 156 206 IPR045314 GO:0003700|GO:0006355
Spst8g01766 324 Gene3D - 154 210 - -
Spst8g01766 324 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 153 205 IPR004827 GO:0003700|GO:0006355
Spst8g01766 324 Coils Coil 171 205 - -
Spst8g01766 324 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 158 173 IPR004827 GO:0003700|GO:0006355
Spst8g01766 324 SMART brlzneu 151 215 IPR004827 GO:0003700|GO:0006355
Spst8g01766 324 SUPERFAMILY Leucine zipper domain 155 205 IPR046347 GO:0003700|GO:0006355
Spst8g01766 324 Coils Coil 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01766 Spst-Chr8 21247291 21251360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01766 97 323 bZIP Transcription Factor Family AT5G24800 51.709 5.07e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst8g01766 bZIP_1 5.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01766 K25784 - gmx:778193 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00906 9 7917771 7928727 Spst8g01766 8 21247291 21251360 PCT