Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01763 ATGTCTACGGATCTAAAGAAATCTAACAAGATCAGGGAAATTGTTAGACTTCAACAGATCCTCAGGAAATGGAGAAAGCTTGCTGATTCTTCAAAAGCCACTGCTAACACCACTGTGGCCACCACCACAACCACCAGTAAGAGTATGAGGTTTCTGAAGAGAACCCTTTCCCTATCAGAACGTGAGGGAGGGTCAAGCAATGGTGTTCCAAAAGGGTACCTTGCTGTTTGTGTTGGTGAAGAGCTTAAGAGGTTCATCATACCAACTGAGTATTTGGGTCACCAAGCCTTTCAGATGCTCCTGAGAGAAGCAGAAGAAGAATTTGGGTTTCAACAAACAGGTGTTCTCAGAATTCCTTGTGAAGTGGCTGTTTTTGAGAGTATCTTGAAGATGGTGGAAGGGAAAGGGGACATGTTTTCCTCCCAAGAACGTAGACTCAGCATTGAAGAGATGATCATGGGGTACTGCTCAGAAAACCAGCTTGCATATTCTCACCATCCTCAGAGTCCATTGTGCAGATAG 522 0.4444 MSTDLKKSNKIREIVRLQQILRKWRKLADSSKATANTTVATTTTTSKSMRFLKRTLSLSEREGGSSNGVPKGYLAVCVGEELKRFIIPTEYLGHQAFQMLLREAEEEFGFQQTGVLRIPCEVAVFESILKMVEGKGDMFSSQERRLSIEEMIMGYCSENQLAYSHHPQSPLCR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01763 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 50 128 IPR003676 GO:0009733
Spst8g01763 173 Pfam Auxin responsive protein 29 132 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01763 Spst-Chr8 21199162 21199683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01763 6 173 Calmodulin-binding Proteins AT4G31320 50.785 1.80e-56 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01763 K14488 - gmx:100779842 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00903 9 7900989 7901507 Spst8g01763 8 21199162 21199683 PCT