Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01744 ATGCATTTATTACCCTCTTCCTCCTCTACTGCACAATCACTGGTTGCATTTGTGGCTATCACTCTTGTGCTGTGCCAACAAGCTTGCAGTGCCAAGCATCGCCCAACTTGCCTTCCTTCCTCATGCGGAAAAATTCACAGTATAAAATATCCATTTCGACTGAAAGACGATCCAAGCGGGTGCGGTCTCCCAAGGTACGAATTAGATTGCGTGAATAACGTCACAGTGTTGACTCTGTTTTCAGGGAAATATCATGTGCTCGACATCGATTACAATAAGTACCAGATCCGATTGACTGATGCCGGTGTTGCAGAGGACAGTGCTTGCTCCATTCCTCGCTATTTCTTATACAAAGGAAATTTTAGTTTTTTCAATCTCAGGAATATTCCTGACTTAGTTTATTTGGATTTGTATTCGGAATTGGGGGAAATGGACTCGTGGCCTCCAAGCATAGGGTTCTTAAACTGTACTAATCCAGTAACTGATGATGATCCTCTATATGTTAAAGTGGAGGCCAGTGACTGTGATTCCAGAGGTCATATGTATGCTGTTGTGATGAATGAAAATCGATATAGTCGCATGGGAGACATTAAGGTTGGGTGTCGTTTAAAGGTAGCAACCTTTGCAGACGCAGAATGGACACACGCCAACCTTTCCTATGCTGATATTCGTCAATATTTGGGAAACGGATTTTTGTTATCTTGGTTCGCACCAGTTATTTGTAGGGATCACTGCGGAAGTGGAGTCACGTGCTCTCTCATTAACGAAACCACAGAACGAGTTGAGTGTGGATACAAAGGGCACTGCCATATCTGGGAATATGAATCCGAAAACTGCGGACTTCCATTCATAATTCTTCAATATATACGACTAATTCCTGGCCATACAGTAGGTTTTGTCTTTGACGCTATAATGGGATTTGTTCATAGAATAAGTTATGGCGAGAGCCACTGGGACAAGAATGAAGTACAATACTTTGCGACATATCCCGACAAAAGCGAGTGGGATTACAAAGGAGAAATTGTTGGAGAAAATGTTCTGCCAATATTCGTATCAGTATTTGTGGGAACCAGAATTCTATTTGGAGTCACACTTTTGCTTGTCCTGTTTATCTATAGGTGGCGTCGAAGACATCATTCAGTGTATGGAAATATTGAAAATTTTCTGCTAGACAACAGTTTAAACCCCGTTAGGTACGAATACAGTGAAGTCAAGAAAATGACTAGAAATTTCAAACAAAAATTGGGTCAAGGTGGTTTTGGCTATGTATATAAAGGAAAACTTCGATGTGGATCAGATGTTGCAATAAAGATGTTGAAGAAATCCAAAGTTAATGGGCAAGAGTTTACGAGTGAAGTGGCTACCATTGGTAGAATACATCATGTGAATGTTGTTCGTCTTATTGGATATTGTGCTGAAGGAGAAAAACGTGCACTAGTATACGAATACATGTCTAATGGTTCTTTGGATAAATACATTTTCTCTAAAGAAGGAAGTGTCCCTTTAAGCTATGAGAAAACATATGAAATATCTCTTGGCATAGCTCGTGGGATTACCTATCTTCATCAAGACTGCGATGTCCAAATTCTACATTTTGATATCAAGCCTCATAACATTCTTCTAGATGATAGTTTCATTCCAAAGATTTCAGATTTCGGACTTGCAGAGTTATATAATGTAAAGGATAGATCTGTTGTTTTAAGTGGAGTGAGAGGAACTCTAGGTTACATGGCTCCTGAATTGTTTTATAAAAATATTGGTGGAGTGTCATATAAGGCAGATGTCTATAGTTATGGAATGCTTTTGATGGAAATGGGAAGTAGGAGGCGAAATTCAAATCCTCGTGCAGAGCATTCAAGTCAACATTATTTCCCTTTTTGGATCTATGATCAATTTAAAGAAGAAAAGGAAATTGACATGAAAGATGCGTCCGAAGAGGACAAGATTCTACTGAAAAAAATGTTCACAGTGGCACTTTGGTGTATACAATTAAAACCAGATCATCGTCCTTCGATGAAAAAGGTTGTAAAGATGCTGGAAGGAAAAGTTGAAAGTCTTGAAATGCCTCCAAAGCCTGTTTTTTATCCTGATGAAATAATTGGAGATGATGGTGGAATCAACTCTGACCAAAACATCTTCGAGTGA 2145 0.3921 MHLLPSSSSTAQSLVAFVAITLVLCQQACSAKHRPTCLPSSCGKIHSIKYPFRLKDDPSGCGLPRYELDCVNNVTVLTLFSGKYHVLDIDYNKYQIRLTDAGVAEDSACSIPRYFLYKGNFSFFNLRNIPDLVYLDLYSELGEMDSWPPSIGFLNCTNPVTDDDPLYVKVEASDCDSRGHMYAVVMNENRYSRMGDIKVGCRLKVATFADAEWTHANLSYADIRQYLGNGFLLSWFAPVICRDHCGSGVTCSLINETTERVECGYKGHCHIWEYESENCGLPFIILQYIRLIPGHTVGFVFDAIMGFVHRISYGESHWDKNEVQYFATYPDKSEWDYKGEIVGENVLPIFVSVFVGTRILFGVTLLLVLFIYRWRRRHHSVYGNIENFLLDNSLNPVRYEYSEVKKMTRNFKQKLGQGGFGYVYKGKLRCGSDVAIKMLKKSKVNGQEFTSEVATIGRIHHVNVVRLIGYCAEGEKRALVYEYMSNGSLDKYIFSKEGSVPLSYEKTYEISLGIARGITYLHQDCDVQILHFDIKPHNILLDDSFIPKISDFGLAELYNVKDRSVVLSGVRGTLGYMAPELFYKNIGGVSYKADVYSYGMLLMEMGSRRRNSNPRAEHSSQHYFPFWIYDQFKEEKEIDMKDASEEDKILLKKMFTVALWCIQLKPDHRPSMKKVVKMLEGKVESLEMPPKPVFYPDEIIGDDGGINSDQNIFE 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01744 714 SUPERFAMILY Protein kinase-like (PK-like) 394 680 IPR011009 -
Spst8g01744 714 ProSiteProfiles Protein kinase domain profile. 409 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01744 714 SMART serkin_6 409 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01744 714 Gene3D Phosphorylase Kinase; domain 1 389 483 - -
Spst8g01744 714 FunFam serine/threonine-protein kinase PBS1-like 383 483 - -
Spst8g01744 714 ProSitePatterns Protein kinases ATP-binding region signature. 415 437 IPR017441 GO:0005524
Spst8g01744 714 FunFam PR5-like receptor kinase 484 691 - -
Spst8g01744 714 Pfam Protein kinase domain 411 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01744 714 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Spst8g01744 714 PANTHER RUST RESISTANCE KINASE LR10-RELATED 379 695 IPR045874 GO:0004672
Spst8g01744 714 Gene3D Transferase(Phosphotransferase) domain 1 484 688 - -
Spst8g01744 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01744 Spst-Chr8 20894225 20897360 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01744 398 713 Receptor kinase-like Gene Family AT5G38280 48.923 8.43e-98 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst8g01744 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01744 - - gmx:100170745 863.218