Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01743 ATGGGAATGAGTAGGTGTACAAAGACAACTGTGGCTGCAAAGGATTTCTATTCTAAAGCGCTTGCAAGACACACCACAATGTCTAATTTTCAGAAAATTTCTCTTCTATTTATGGTGTTGTTTCTCCAAGGGAAGCCTGTGATAAGCAAGAATCGGTGCAGGGACAAGTGTGGAGACATCCATATTCTATTTCCATTTTACCTCAAAAATAACAAACTGAATAACACCATGTATCCCCCTGGATTCGATTTGTTTTGCAACGAACGAGGTGAGACTGTGTTAGAGTTGCCTGCAGTTTCAATTAAATTATTTGTCGAAAGAATAGATTACAAGTCACAGCAAATCCAAATCTACGACCCAGAAAATTGCCTTGCCAAGGTGCTCTCACAACTCGGCAATTCATCTGTTTATCCATTCAAATTCAAACCACTTTATGGAGACGTACAAAAGTCAAACGCTTCCGTCTTCCTTTGCAATTCAACGTCGTGCCCTATTGTGAAACCATCTTACAGGTTCTTGATTAATCCCGACATTATATCATGCACCAAGGTGAAAGATATTTTGTCTGTTGAGTGGTTCTATCAGGAGGATCTTCGTGGATATTATGATGAGTTTATCTCGATTATGGAATGGTCCAAACCCAACTGTAGTCATTGTGAAGCACAAGGGCAGATGTGCAAATGGAAGAACGGTACCCTAGGGATAATAGTTGGTTTGATACTTTTGCTGCTACTGGTGAAGGCATCGTTTCATGTGTTTGACTATTATGAGAAGAAAGGAGAAGACCAGGCTCGAATAGAGAAATTCTTGGAGGATTACAGGGCAATGAAGCCTACCAGATTCACCTACGCTGACATTAAGAGAATCACAAATGGGTTTAGTGAAAGTCTAGGAGAAGGAGCTCATGGAGCCGTGTTCAAAGGAATGCTCTCCCGAGAAATTCTCGTTGCTGTGAAGAAACTCAACGACACATTGGGAGATGGGAAGGATTTCATAAACGAAGTGGGAACCATGGGCAAAATTCATCACGTCAACATTGTTCGCTTGCTTGGATTCTGTGCGGATGAGTTCCACCGTGCTCTTGTCTACGATTTCTTTCCAAACGGGTCATTGCAGAGATTCCTGGCTCCACCGGACAACAAGGATGTTTTCCTTGGTTGGGAGAAGTTGCAACAAATTGCTCTTGGTGTTGCCAGAGGAATTGAGTATCTCCACCTTGGCTGTGATCATAGAATACTTCACTTTGACATCAACCCTCACAATGTTTTGCTAGATGACAACTTCGTCCCAAAAATCACTGATTTTGGACTTTCCAAGTTGTGTCCCAAAAATCAGAGCATAGTGTCTATGACTGCAGCCAGGGGAACCTTGGGCTACATTGCCCCGGAAGTTTTCTCAAGAAAATTTGGGAATGTGTCTTACAAGTCTGACATCTATAGTTATGGAATGTTGCTGCTGGAAATGGTTGGAGGAAGAAAGAATATGTGTCGGTTGAGGACAGTTTCCAAGTTTTGTACCCAGAGTGGATCCATAATTTGTTGGAAGGCAGAGACATGCACATTAACATTGAGGATGAGGAAGATGTTAAAATTGCGAAGAAACTTGCCACTGTAG 1614 0.4201 MGMSRCTKTTVAAKDFYSKALARHTTMSNFQKISLLFMVLFLQGKPVISKNRCRDKCGDIHILFPFYLKNNKLNNTMYPPGFDLFCNERGETVLELPAVSIKLFVERIDYKSQQIQIYDPENCLAKVLSQLGNSSVYPFKFKPLYGDVQKSNASVFLCNSTSCPIVKPSYRFLINPDIISCTKVKDILSVEWFYQEDLRGYYDEFISIMEWSKPNCSHCEAQGQMCKWKNGTLGIIVGLILLLLLVKASFHVFDYYEKKGEDQARIEKFLEDYRAMKPTRFTYADIKRITNGFSESLGEGAHGAVFKGMLSREILVAVKKLNDTLGDGKDFINEVGTMGKIHHVNIVRLLGFCADEFHRALVYDFFPNGSLQRFLAPPDNKDVFLGWEKLQQIALGVARGIEYLHLGCDHRILHFDINPHNVLLDDNFVPKITDFGLSKLCPKNQSIVSMTAARGTLGYIAPEVFSRKFGNVSYKSDIYSYGMLLLEMVGGRKNMCRLRTVSKFCTQSGSIICWKAETCTLTLRMRKMLKLRRNLPL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01743 537 PANTHER RUST RESISTANCE KINASE LR10-RELATED 263 496 IPR045874 GO:0004672
Spst8g01743 537 ProSitePatterns Protein kinases ATP-binding region signature. 297 320 IPR017441 GO:0005524
Spst8g01743 537 Gene3D Transferase(Phosphotransferase) domain 1 366 530 - -
Spst8g01743 537 SUPERFAMILY Protein kinase-like (PK-like) 273 500 IPR011009 -
Spst8g01743 537 Pfam Wall-associated receptor kinase galacturonan-binding 53 119 IPR025287 GO:0030247
Spst8g01743 537 Gene3D Phosphorylase Kinase; domain 1 265 365 - -
Spst8g01743 537 FunFam serine/threonine-protein kinase PBS1-like 258 365 - -
Spst8g01743 537 Pfam Protein kinase domain 295 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01743 537 ProSiteProfiles Protein kinase domain profile. 291 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01743 Spst-Chr8 20892056 20894112 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01743 233 492 Receptor kinase-like Gene Family AT1G66910 47.510 1.51e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst8g01743 Pkinase 3.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01743 - - gmx:102669457 717.613