Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01741 ATGCTCAATTTTCAGAAATTTTCTCTTGTATCATTCACGTTGGTGTTTCTGCTACTAAAGTCTGTCACAGGGAATAACCACTACACTCAGAAATGTGGACGCGTTCATATTCAATTTCCATTTTATCTCAAAAACAACAACTTGAATAACGCCTCGGACTTTCCACCGGGGTTCGATCTGTTATGCACCGAAAAACATGAGACTGTGCTGGAGCTTCCTGTTGTTCCAATCAAACTATTTGTCAAAAACATTGATTACAAATCTCAGCAAATTGAAATATATGACCCTGATAATTGCCTTCCCAATCAGCTCTTGAAACTCGGCAACGCATCCGTTTCTCCATTCCAAATCTGGTCACGAAATGATGGTCCTAACGGGTCTGCCATTGCCTTCTTCCGTTGCGACATGTCGTCGTGTCCTGTTTTGCTACTTCAATCTTACGCCGACGCTAATGACCCCCAAATATTATCCTGCACCAAAGTGAAAGACGTTCAGTCTGTCAAGTGGGGACTATCGTATTTATTTAACAATAAATTGTTGATAGCATGGTCGAAACCTAACTGTGGATCCTGTGAAGCAAAAGGCCAGAAATGTAAATGGAAGAATTATACCAAGGGGGAAACTGAATGTTTCGTTTGGTCAACAAACAGGATTTCCACATCAACTATTGTACTTATCACTGCGGGAGGAATAGTTGGTTTGATGATTTTGCTGCTACTGGCGAAGGCATTGTTTCATGTGTATGACTATTATGAGAAGAAAGGAGAAGACCAGGCTCGGATAGAGAAATTCTTGGAGGATTACAGGGCAATGAAGCCTGCCAGATTCACTTACGCTGACATAAAGAGAATCACAAATGGGTTTAGCGAAAGTTTAGGAGAAGGAGCTCATGGAGCAGTGTTCAAAGGAATGCTCTCCCGAGAAATTCTCGTTGCTGTGAAGAAACTCAACGACACAATGGGAGATGGGAAGGATTTCATAAACGAAGTGGGAACCATGGGCAAAATTCATCACGTCAACATTGTTCGCTTGCTCGGATTCTGTGCGGATGAGTTCCACCGTGCTCTTGTCTACGATTTCTTTCCAAATGGGTCATTGCAGAGATTCCTGACTCCACCTGACAACAAGGATGTTTTCCTTGGTTGGGAGAAGTTGCAACAAATTGCTCTTGGTGTTGCCAGAGGGATTGAGTATCTCCACCTTGGCTGTGATCATAGAATACTTCACTTTGACATCAACCCTCACAATGTTTTGCTAGATGACAACTTCGTCCCAAAAATCACTGATTTTGGACTTTCCAAGTTGTGTCCCAAAAATCAGAGCATAGTGTCTATGACTGCAGCCAGGGGAACCTTGGGCTACATTGCCCCGGAAGTTTTCTCAAGAAACTTTGGGAATGTGTCTTACAAGTCTGACATCTATAGTTATGGAATGTTGCTGCTGGAAATGGTTGGAGGAAGAAAGAATACAAATCCGTCGGTTGAGGACAGTTTCCAAGTTTTGTACCCAGAGTGGATCCATAATTTGTTGGAAGGCAGAGACATGCACATTAACATTGAGGATGAGGGAGATGCTAAAATTGCGAAGAAACTAGCCATTGTAGGACTTTGGTGCATTCAATGGAACCCAGTGGACCGTCCATCAATAAAAACTGTGGTGCAAATGCTTGAAGGGGATGGAGATGAGTTAGTAGCACCACCTCCTCCTTTTGACATCTCTTCTTCCACAAAAAATGTCCTTGTTCCACCATCAAGACGTCAGAATTTTGAATTGGAAGTTATTCATGAAATAGAAGAGTAA 1800 0.4239 MLNFQKFSLVSFTLVFLLLKSVTGNNHYTQKCGRVHIQFPFYLKNNNLNNASDFPPGFDLLCTEKHETVLELPVVPIKLFVKNIDYKSQQIEIYDPDNCLPNQLLKLGNASVSPFQIWSRNDGPNGSAIAFFRCDMSSCPVLLLQSYADANDPQILSCTKVKDVQSVKWGLSYLFNNKLLIAWSKPNCGSCEAKGQKCKWKNYTKGETECFVWSTNRISTSTIVLITAGGIVGLMILLLLAKALFHVYDYYEKKGEDQARIEKFLEDYRAMKPARFTYADIKRITNGFSESLGEGAHGAVFKGMLSREILVAVKKLNDTMGDGKDFINEVGTMGKIHHVNIVRLLGFCADEFHRALVYDFFPNGSLQRFLTPPDNKDVFLGWEKLQQIALGVARGIEYLHLGCDHRILHFDINPHNVLLDDNFVPKITDFGLSKLCPKNQSIVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNPSVEDSFQVLYPEWIHNLLEGRDMHINIEDEGDAKIAKKLAIVGLWCIQWNPVDRPSIKTVVQMLEGDGDELVAPPPPFDISSSTKNVLVPPSRRQNFELEVIHEIEE 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01741 599 Pfam Protein kinase domain 290 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01741 599 FunFam PR5-like receptor kinase 361 567 - -
Spst8g01741 599 ProSitePatterns Protein kinases ATP-binding region signature. 292 315 IPR017441 GO:0005524
Spst8g01741 599 PANTHER RUST RESISTANCE KINASE LR10-RELATED 258 573 IPR045874 GO:0004672
Spst8g01741 599 Gene3D Phosphorylase Kinase; domain 1 260 360 - -
Spst8g01741 599 Pfam Wall-associated receptor kinase galacturonan-binding 30 95 IPR025287 GO:0030247
Spst8g01741 599 Gene3D Transferase(Phosphotransferase) domain 1 361 563 - -
Spst8g01741 599 ProSiteProfiles Protein kinase domain profile. 286 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01741 599 FunFam serine/threonine-protein kinase PBS1-like 253 360 - -
Spst8g01741 599 SUPERFAMILY Protein kinase-like (PK-like) 268 557 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01741 Spst-Chr8 20883646 20885608 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01741 251 569 Receptor kinase-like Gene Family AT1G66980 50.153 6.96e-101 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst8g01741 Pkinase 3.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01741 - - gmx:100819302 895.96