Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01739 ATGAGTCTCCTATTTTCTTCCTGCTCCAGTTCTCAGTCAAAGCTGGCCTCTGTGACTATCATTCTTGTGCTATTCCAACAAGCTTGCTTTGCCAAGCATCATCCATCATGTACTGCTTCTTCATGCGGCAAAATTCGCAACATAACATATCCATTTCGACTGAAAGGCGACCCAGAAGGTTGCGGCCTCCCAAGTTACGAACTAGATTGCGTGAACAACGTGACAGAGTTAACTCTGTTTTCAGGGAAATACTACGTGCATGATATCGATTACAAGAGGTACCTGATCCAATTGACTGATGCGGGTGTTGTGGATGACACTGCTTGCTCCATTCCTCGCTATTTCTTATCTTCAAGGAATTTCACTTACGTTGTTGGTCCTGACTATACTACACCAGATCCGCTGACTTTGTGGCATAACGATTGGAACTTATTACGGTTTGAAATGGTTGGGGTCTTGAACTGTACTAATCCAGTGACTGATGACCCTCGATATGTGGAAGTGGATTCGGGTTGTGATTCGGGAGGGCATATCTACATGGTTTTCTCTTCTTTTCGGATGGAGGATATTAAGATCGGGTGCTATCTGAAGGTAGCCACCTTTGCAAATAAAACCCTTTCTTATAACAGGAACGTTTCCTATGCTGATATCCACAAGAGCCTTGTCGAGGGGTTTTCTTTGTCTTGGGTGCTCCCTGTTACTTGCAAGGATCGTTGCAGAAAAGGTATCAGATGCATTTTCAATGAAACCTCAGAAGAAGTTGAATGTGATCCCCAACGTTACTGCCACTACGTCTATCGTACCACCACCAAGTGCGGAATTACCTCAAAGATTCTTGTAAATACACTAGGCTTTCTCAAAGGCATTATTATTGGACTATTGAGTAGGTTGACATTTAGTACGAAACAATTAAACCAACCAGTTTCCCAACAATATTTCGATGGAGCCGTATACATAGGGCGTAATATTGTGTCAGCATTCATTGCAGCCAGATATCTATTTGGTGTTGCACTTCTGCTTGGGTTATTCATATACAAGTGGCAACGAAGACATTTATCAATGTATGAAAACATAGAAAATTTTTTGGTGGACAACCATCTAAATCCCATTAGGTATGAATACAGAGAAATCAAGAAAATGACTGGAGGTTTCAAAGTGAAATTGGGTCAAGGAGGTTTCGGTTCAGTATATAAGGGGAAACTTCGAAGTGGACCAGATGTAGCAGTAAAGATGTTGAACAAATCCAAAGCTAATGGACAAGATTTTATTAATGAAGTGGCTACTATTGGAAGAATACATCACACTAATGTGGTACGTCTTATTGGATATTGTGTTGAAGGAAAAAAACGTGCTTTAGTTTATGAATACATGCCTAATGGTTCATTGGACAAATACATTTTCTCTAAAGAAGGAAGTTTCCCTTTAAGCTATGCACAAGCATATGAAATATCACTTGGCATAGCTCTTGGGATTTCTTATTTGCACCAAGGTTGTGATGTACAAATTTTACATTTTGATATCAAGCCTCATAATATTCTTCTGGATGATAGATTTATCCCGAAGGTTTCAGATTTTGGACTTGCAAAGCTATATCCCGTAGATGATAGTATTGTTACTTTGACAGATGCAAGAGGAACTTTAGGCTACATGGCTCCAGAATTGTTTTACAAAAATGTTGGAGGAGTATCTTTTAAGGCAGATATCTATAGCTTTGGTATGCTTTTGATGGAAATGACAAGTAGGAGGAAGAACTCAAATCCTCATGCAGAACATTCAAGCCAAAATTATTTTCCTTTATGGATCTATGATCAATTTAAAGAAGAAAAAGATATAGAGATGGACGATTTTTCAAAGGATGAAAAGTGTATAGCAAAAAAGATGTTTTTAGTTGCACTTTGGTGTATTCAATTGAAACCGATGGATCGTCCCTCGATGAATAAGGTAATAGAGATGCTTGAAGGGGAAACTGAAAACCTTATAATGCCTTCAAGGCCATCTTTTTATCCAAATGAAATTTCTGAAATGGGTGTCTCAGTCAATTCTAACCAGACATCGTGGAATGATTCTACTGACTCAGATACCTATCTTGGTGAAACCACAAACAGTTTGTGCCCAACATAA 2121 0.3894 MSLLFSSCSSSQSKLASVTIILVLFQQACFAKHHPSCTASSCGKIRNITYPFRLKGDPEGCGLPSYELDCVNNVTELTLFSGKYYVHDIDYKRYLIQLTDAGVVDDTACSIPRYFLSSRNFTYVVGPDYTTPDPLTLWHNDWNLLRFEMVGVLNCTNPVTDDPRYVEVDSGCDSGGHIYMVFSSFRMEDIKIGCYLKVATFANKTLSYNRNVSYADIHKSLVEGFSLSWVLPVTCKDRCRKGIRCIFNETSEEVECDPQRYCHYVYRTTTKCGITSKILVNTLGFLKGIIIGLLSRLTFSTKQLNQPVSQQYFDGAVYIGRNIVSAFIAARYLFGVALLLGLFIYKWQRRHLSMYENIENFLVDNHLNPIRYEYREIKKMTGGFKVKLGQGGFGSVYKGKLRSGPDVAVKMLNKSKANGQDFINEVATIGRIHHTNVVRLIGYCVEGKKRALVYEYMPNGSLDKYIFSKEGSFPLSYAQAYEISLGIALGISYLHQGCDVQILHFDIKPHNILLDDRFIPKVSDFGLAKLYPVDDSIVTLTDARGTLGYMAPELFYKNVGGVSFKADIYSFGMLLMEMTSRRKNSNPHAEHSSQNYFPLWIYDQFKEEKDIEMDDFSKDEKCIAKKMFLVALWCIQLKPMDRPSMNKVIEMLEGETENLIMPSRPSFYPNEISEMGVSVNSNQTSWNDSTDSDTYLGETTNSLCPT 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01739 706 SMART serkin_6 382 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01739 706 ProSiteProfiles Protein kinase domain profile. 382 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01739 706 Pfam Protein kinase domain 386 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01739 706 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
Spst8g01739 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Spst8g01739 706 FunFam PR5-like receptor kinase 457 663 - -
Spst8g01739 706 CDD STKc_IRAK 388 654 - -
Spst8g01739 706 PANTHER RUST RESISTANCE KINASE LR10-RELATED 355 673 IPR045874 GO:0004672
Spst8g01739 706 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Spst8g01739 706 Gene3D Phosphorylase Kinase; domain 1 358 456 - -
Spst8g01739 706 MobiDBLite consensus disorder prediction 684 706 - -
Spst8g01739 706 SUPERFAMILY Protein kinase-like (PK-like) 368 653 IPR011009 -
Spst8g01739 706 FunFam serine/threonine-protein kinase PBS1-like 352 456 - -
Spst8g01739 706 Gene3D Transferase(Phosphotransferase) domain 1 457 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01739 Spst-Chr8 20850989 20853536 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01739 9 665 Receptor kinase-like Gene Family AT1G66910 35.536 6.19e-112 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst8g01739 Pkinase 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01739 - - lja:Lj0g3v0275229.4 892.493