Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01738 ATGGTGAAGGATGGAAAACGAACGTTTTTTTGCTCTGCAAGCACTCTCGTGTCAATATTGGCTACAATTCTTCTCCTATTCCAACCAGATTACTGCATCGCTAAGCGACAACCACCATGTACACCTTCATCATGCGGCCAAATCGGCCACATAGCATACCCATTTCGCCTCAAAGATGACCCAAGCCACTGTGGCGACCCAAGGTACGAGTTAGAGTGCGTGAACAACGCCACACTCTTAACTCTGTTCTCGGGAAAATACCGTGTGCATGATATCGACTACAAGGGATACAAAATCCAGGTTAGTGACCCGGGTGAAGAGGAGGAGGATGGTAACTGCTCCTTCATCCCTCGCAATTACTTAACGGAGGCTTATTTCAGGCCCACGGGCCTGGTTGGCCCAGATGATTTCGGAGCACAGCCGTTCATTTGGAACCCCTCGTATACTTTCAGAATAGGATACTTCAACTGCGCCAATCCTGTGAGTGACGATCCACGATATGTTAAGGTGGAGAGAAGTGGATGTGGCAGCGGAGGGCACGTGTATGCTTTTCTTGAACCGTCGTTGTTTACCTGTTGGGTGAAGGACATCAAGGTTGGGTGCGATTTAATGGTGGCTACGGTGGTTGATTGGGCGGAGAGGGAGAATGTTACCTACGATGTGATCCATCGCAGCATAAGTGAGGGAATTGAGTTGTCGTGGTTGCCTGTTATTTGCGAAGATCGATGTGGAAAAGGGACCGAGTGTACGGTTGTCGATAAATCCAACGGAGAAGTCCAGTGTGAGAAGCATTACTGTCATTACGCCTACCACACCACTGATAAGTGCAAAATTTGGCAAAAGATTTTTGGCTATACTCGAGCGTATCTTAGAGGCGTTATTTTTGGAATAGGTAGCAGAATAACATTCAGCACGAAACAATTGGACAACCCAGTTGGACTGCAATATTTCGATGGAGGAATATTCATAGGACGAACTGTTATACCAATAGTTTTGGCTGCCAGATATCTGTTAGGAGTTGTACTTATTCTTGTGTTATTGATCTACAAATGGAGCCGAAGACATTTTTCAATATATGAAAATATTGAAAATTTCTTGCTAGATAGCCATCTAAATCCCGTTAGGTATGAATACAAAGAAATCAAAAAAATGACAGGAGGTTTCAAAGTGAAATTGGGTCAAGGAGGCTTTGGTGCTGTATATAAAGGAAAACTCCGAAGTGGATTGGATGTAGCAGTAAAGATGTTGAGCAAATCGAATGATAATGGACAAGATTTTATCAATGAAGTAGCTACCATTGGGACAATACATCATGTAAATGTGGTGCGTCTTATTGGATATTGTGTTGATAGAAAAAAGCGTGCTCTAGTTTACGAATATATGTCTAATGGGTCATTGGATAAATACATTTTCTCCAACGAAAAAGGAACCCCTTTAAGCTACGAGAAAATATACGAAATATCTCTCGGAATAGCTGATGGGATTGCATATTTGCATCAAGGTTGTGATATGCAAATTCTGCATTTTGATATCAAGCCTCATAATATTCTTTTAGATGCCAACTTTGTTCCAAAGGTTTCAGATTTTGGACTTGCAAAGCTACATGCTGTAGATGAGGGCGTTGTTAATATGACTGCAGCGAGAGGAACATTGGGTTATATGGCTCCCGAGTTGTTTTACAAAAATATGGGTGGGGTAACTTATAAAGCTGATGTATATAGTTTTGGAATGCTTTTAATGGAAATGGCAAGTAGGAGGAGGAACTCAAATCCTCATGCAGAACATTCAAGTCAGCATTACTTTCCCTTTTGGATTTATGATCAATTTAAAGAAGAGAAAAATATTAATATGGAAGATGCTTCAGAAGAAGACAATATTCTAGCTAAAAAGATGTTTCTGGTTGCCCTATGGTGTATTCAGTTAAATCCCAGAGATCGTCCTTCGATGAATAAGGTAATGGAGATGCTTGAAGGGAAGATTGAAAGCCTTGAATTGCCTCCAAGGCCTTCCTTTTATAAAAATGAAACATACAGACATGATGATGTTATCTCTGACGAAGCTTCATTCACTAATTCCACTTATTCTGATAGTTAA 2094 0.4107 MVKDGKRTFFCSASTLVSILATILLLFQPDYCIAKRQPPCTPSSCGQIGHIAYPFRLKDDPSHCGDPRYELECVNNATLLTLFSGKYRVHDIDYKGYKIQVSDPGEEEEDGNCSFIPRNYLTEAYFRPTGLVGPDDFGAQPFIWNPSYTFRIGYFNCANPVSDDPRYVKVERSGCGSGGHVYAFLEPSLFTCWVKDIKVGCDLMVATVVDWAERENVTYDVIHRSISEGIELSWLPVICEDRCGKGTECTVVDKSNGEVQCEKHYCHYAYHTTDKCKIWQKIFGYTRAYLRGVIFGIGSRITFSTKQLDNPVGLQYFDGGIFIGRTVIPIVLAARYLLGVVLILVLLIYKWSRRHFSIYENIENFLLDSHLNPVRYEYKEIKKMTGGFKVKLGQGGFGAVYKGKLRSGLDVAVKMLSKSNDNGQDFINEVATIGTIHHVNVVRLIGYCVDRKKRALVYEYMSNGSLDKYIFSNEKGTPLSYEKIYEISLGIADGIAYLHQGCDMQILHFDIKPHNILLDANFVPKVSDFGLAKLHAVDEGVVNMTAARGTLGYMAPELFYKNMGGVTYKADVYSFGMLLMEMASRRRNSNPHAEHSSQHYFPFWIYDQFKEEKNINMEDASEEDNILAKKMFLVALWCIQLNPRDRPSMNKVMEMLEGKIESLELPPRPSFYKNETYRHDDVISDEASFTNSTYSDS 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01738 697 Pfam Protein tyrosine and serine/threonine kinase 389 656 IPR001245 GO:0004672|GO:0006468
Spst8g01738 697 SUPERFAMILY Protein kinase-like (PK-like) 371 657 IPR011009 -
Spst8g01738 697 SMART serkin_6 386 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01738 697 CDD STKc_IRAK 392 658 - -
Spst8g01738 697 Gene3D Phosphorylase Kinase; domain 1 363 460 - -
Spst8g01738 697 ProSiteProfiles Protein kinase domain profile. 386 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01738 697 PANTHER RUST RESISTANCE KINASE LR10-RELATED 359 675 IPR045874 GO:0004672
Spst8g01738 697 Pfam Wall-associated receptor kinase galacturonan-binding 40 103 IPR025287 GO:0030247
Spst8g01738 697 FunFam PR5-like receptor kinase 461 667 - -
Spst8g01738 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Spst8g01738 697 ProSitePatterns Protein kinases ATP-binding region signature. 392 414 IPR017441 GO:0005524
Spst8g01738 697 FunFam serine/threonine-protein kinase PBS1-like 359 460 - -
Spst8g01738 697 Gene3D Transferase(Phosphotransferase) domain 1 461 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01738 Spst-Chr8 20846945 20850327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01738 23 696 Receptor kinase-like Gene Family AT5G38260 33.141 6.54e-103 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst8g01738 PK_Tyr_Ser-Thr 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01738 - - gmx:100820366 1132.47