Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01737 ATGAACAGAGGAACAATACGAATACGCTTTATCGCCATTCTTCTATTTCTAGAAACTTCCGCCACCGCGCTCATTCCCGATTGTCCTGCTTCCTCCTGCGGCAACATTCCCAACATTCGTTACCCCTTTCGACTCAGCAGTGACCCTTCTCACTGCGGCGACAAGCGGTACCAATTGTATTGCGAGAACAACGCAACTTTCTTGACTCTGTTTTCGGGCAAATACAGAGTCCATGAAATCGATTACAACAGATACAAAATCCGAGTGAGTGATGCGGAGGACGGTACGTGCTCCTTCATGCCTCGTTATTTCTTGTATTATGGCAATTTCAGTAACGCCATTCTGGGCCCTGGAACGGATCCGCTGAAATTGGACCCATTTTCTCAACCGTCGATAGCTTATTTCAACTGTTCCGATCCAATCACCGACGATCCCAGATATGTGGCGGTGGAAGGCACTGGTTGTGACCACAGAGGGAACGTTTACGCTGTTGTTAAGGATTCGGGAAATGGTTTTGGTGTGGAGGATATCAAGGTTGGGTGCGAACTGCAGGTGGCTACTTTTGGTGGTGTCGGAGACCACAGGTCGAAGAAAGGAGTTTCGTACGGTGAAATAAAAAACATGGTTTGGCAGGGATTTAGGTTGTCTTGGTTGTATCTTATTTGTGAAGATCGATGCGGAAAGGGAATAGATTGCAGGGTTGTGAATGAATCCACGGGGGAAGTCCAGTGTGACCAGTATGGCTGCAGTTATGTCTACGACGAACCCAACAACAGGGTCACATACCAGTGCAGCAGCAGCGTCGGTGGCATTGGACGAAAAATATTTTACGCTGTAGTTCTATTTTCGATTGGTGCTTATCGAGGGTTGATGCAAAATTTTGGCTTGAACAAAGCCACAGGATATGACGGTGATAGTGAAGCTGAAATAGGAAAAAGCGTAGGAAGGTATCTCCTACCATACTTTATGATACGGTTTCTATTTGGTGTGGTTATTTTTGTTATGTTGTTGATCTATAAATGGGGAAGAAGACACAAATCAAAGTATGAAAATATTGAATCTTTTCTAGAAGGAAACACCCTCATGCCAATAAGATACTCCTACAAAGAAATAAAGCACATGACTAAGGGTTTTAAGGAAAAGCTAGGCCAAGGAGGATTTGGTTTGGTATACAAAGGAAAGTTGCGTAGTGGGTTATTTGTTGCAATAAAGATGTTGAGTAAATCAAAGTCTAATGGCCAAGATTTCATCAGTGAAGTTGCTACCATTGGAAGAATACATCATACAAATGTGGTACGACTTATTGGATTTTGTGTTGAATCATCACATCGTGCTCTTGTTTATGAGTTTATGGCTAATGGTTCTCTCGATAAATATATTTTCTCCAAACAAGATAGTATCTCTTTGACTTACAGACAAATATACGATATTTCTCTTGGAGTGGCTCGTGGTATTGCTTATTTGCATCAGGGATGTGACATGCAAATTCTGCATTTTGATATCAAGCCACATAACATTCTTCTTGATGAGAACTTTATCCCAAAGGTTTCAGACTTTGGCTTGGCAAGACTTTATCCTATAAACAAAAGCATTATCACTTTGACTGCAGCAAGGGGAACAATTGGTTACATGGCTCCAGAGTTATTTTACCATAATATTGGGGGAGTATCATATAAGGCAGATGTTTATAGTTTTGGAATGCTTTTGATGGAAATGGCAAATAAAAGAAGAATTTTTAACACACATGTAGATCATTCAAGTGAACTTTTTTTCCCTCTTTGGATATATGATCAATTGAGAGGAGAAAATGAGAAAGAAATGGAAAATGTTACCAAGCAGGAGTATAATGACGAGGCAAAGAAGATGTTTTTAGTAGCATTATGGTGTATACAGTTAAAACCAAGTAATCGTCCTTCAATGAACAAGATAATGGAGATGTTGGAAGGAGAAATTGAGAACATTGAAATGCCTCCAAAACCTTCCTTATATCCAGATGAAATGATTTATGAAATGATTTAA 2019 0.4032 MNRGTIRIRFIAILLFLETSATALIPDCPASSCGNIPNIRYPFRLSSDPSHCGDKRYQLYCENNATFLTLFSGKYRVHEIDYNRYKIRVSDAEDGTCSFMPRYFLYYGNFSNAILGPGTDPLKLDPFSQPSIAYFNCSDPITDDPRYVAVEGTGCDHRGNVYAVVKDSGNGFGVEDIKVGCELQVATFGGVGDHRSKKGVSYGEIKNMVWQGFRLSWLYLICEDRCGKGIDCRVVNESTGEVQCDQYGCSYVYDEPNNRVTYQCSSSVGGIGRKIFYAVVLFSIGAYRGLMQNFGLNKATGYDGDSEAEIGKSVGRYLLPYFMIRFLFGVVIFVMLLIYKWGRRHKSKYENIESFLEGNTLMPIRYSYKEIKHMTKGFKEKLGQGGFGLVYKGKLRSGLFVAIKMLSKSKSNGQDFISEVATIGRIHHTNVVRLIGFCVESSHRALVYEFMANGSLDKYIFSKQDSISLTYRQIYDISLGVARGIAYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLARLYPINKSIITLTAARGTIGYMAPELFYHNIGGVSYKADVYSFGMLLMEMANKRRIFNTHVDHSSELFFPLWIYDQLRGENEKEMENVTKQEYNDEAKKMFLVALWCIQLKPSNRPSMNKIMEMLEGEIENIEMPPKPSLYPDEMIYEMI 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01737 672 Pfam Protein kinase domain 379 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01737 672 SUPERFAMILY Protein kinase-like (PK-like) 361 648 IPR011009 -
Spst8g01737 672 SMART serkin_6 376 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01737 672 FunFam serine/threonine-protein kinase PBS1-like 344 450 - -
Spst8g01737 672 FunFam PR5-like receptor kinase 451 659 - -
Spst8g01737 672 ProSiteProfiles Protein kinase domain profile. 376 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01737 672 PANTHER RUST RESISTANCE KINASE LR10-RELATED 340 661 IPR045874 GO:0004672
Spst8g01737 672 Gene3D Transferase(Phosphotransferase) domain 1 451 657 - -
Spst8g01737 672 ProSitePatterns Protein kinases ATP-binding region signature. 382 404 IPR017441 GO:0005524
Spst8g01737 672 Pfam Wall-associated receptor kinase galacturonan-binding 28 91 IPR025287 GO:0030247
Spst8g01737 672 Gene3D Phosphorylase Kinase; domain 1 352 450 - -
Spst8g01737 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01737 Spst-Chr8 20838708 20846212 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01737 29 663 Receptor kinase-like Gene Family AT5G38260 36.210 7.05e-111 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst8g01737 Pkinase 6.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01737 - - pvu:PHAVU_001G075800g 908.286