Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01736 ATGACCGAGTCCACTGTGCTACTCCTCCAAGGTGAATCCATATTCATCACACTATTGCTAATACTCTTGCTTATCGTAAGTAGCAGCGGCAATAACGAGTCCGCAGAATCGCGTTGTGCGATTGGAGGACCGCCTATTAGATTTCCCTTCCAAAAGGGAATGAAAGATGCATGTGATTCTCCCGGATTTTGTCTATATTGTAGTGAAAAGAATGAGACCATGCTTGTACTCGCTGCAGTAAAACTCCGTGTCACATACATATATTACCCATCTCAGAGTCTTTACTTGGAAGACCCAGAAAATTGCCTTCCGAGGAAGTTTCTAAACCTCAACAATATTTCTATTCTTCCTTACGAATTTTATTCATCAAATTATGGACAAAAAACAAACTTCTTGAACTTCTTCGATTGTTCTTCAGTTGGGCTTCCTCACCTGAGAAACAACGACCAGCTATACCAGACTTCGCAAAATATGATCTCTTGTCCGACTTACGTTTCCAATTCCTACGAAAGTGTCCTTGAACTTGATCTAACATCTTGTACCAAGATGTTCAATATCACTGCGCAGGTCTCGGCATCCAACCTGCGGTTGAATCAGTTGAATTTGAGATGGTCCATACCAGATTGTAGTAAGTGCGAAGCAAAAGGCAGCAGGTGTAAATGGAAGAACAACAGCACAACCGATGTCGAATGTGTTGTTGACTACAATCCCCAAGGAAAAAAAATTGATATTCCCCAATCTTATATTTTCACTGCTACAGGTTCTATTCTTTTGGGGCTGGTGGTTATTGCCGTGTTTAAGATAGCCCACCATTTTAGAAAGAAGGAAGAAGACCAAGCTAGAGTGGAGAAATTTCTAGAGGATTACAGGGCAGACAAGCCTGCAAGATTTACCTATGCTGATGTTAAAAGAATCACAGGTGGTTTTAAGGAAAAGTTAGGAGAAGGAGCTCATGGAGCCGTATTTAGAGGAAAACTTTCAAATGAGATTCAGGTGGCTGTGAAGATCCTCAATAATACAGAAGGAGATGGGAACGATTTCATTAATGAAGTTGGAATTATGGGAAAAATCCACCACATCAACGTGGTTCGTTTGCTTGGCTTTTGTGCTGAAGGACTCCATCGTGCCCTTGTCTACAACTTGTTTCCAAACGGCTCGCTACAAAGCTTCATATTTCCACCGGATGACAAGGACCGTTTTCTTGGCTGGGAGAAGCTGCAACACATTGCTCTTGGAATAGGTAAAGGGATTGAGTATCTTCATCAAGGTTGTGATCATCCCATTATTCACTTCGACATCAATCCTCACAATGTGTTACTCGATGACAACTTCACTCCAAAAATTTCTGACTTTGGCTTAGCCAAATTGTGCTCCAAGAATCCTAGTTTGGTGTCCATGACAGCTGCAAGGGGAACCTTGGGATACATTGCACCTGAAGTGTTTTCCAGAAACTTTGGAAATGTGTCTTACAAATCTGATATCTACAGTTTTGGAATGTTGTTGTTGGAAATGGTTGGAGGAAGGAAGAATGTAGACATATCTTCTGCACAAAATTTTCATGTACTGTACCCGGATTGGATCCATAACCTGGTTGATGGAGATGTCCATATCCATGTTGAGGATGAAGGTGAAGTTAAAATTGCAAAGAAACTAGCAATTGTTGGACTTTGGTGCATTCAGTGGCAGCCAGTGAACCGTCCATCCATAAAATCTGTGATACAAATGCTAGAAACTGCAGAGGAAAACCAGTTAACTGTTCCCCCTAACCCATTTCACTCAACAACTTCCACTACTACTGGTAGACTCACCACAACAAGACGACCTTTGGAGTTGGAAGCGATTCAAGAATGA 1851 0.416 MTESTVLLLQGESIFITLLLILLLIVSSSGNNESAESRCAIGGPPIRFPFQKGMKDACDSPGFCLYCSEKNETMLVLAAVKLRVTYIYYPSQSLYLEDPENCLPRKFLNLNNISILPYEFYSSNYGQKTNFLNFFDCSSVGLPHLRNNDQLYQTSQNMISCPTYVSNSYESVLELDLTSCTKMFNITAQVSASNLRLNQLNLRWSIPDCSKCEAKGSRCKWKNNSTTDVECVVDYNPQGKKIDIPQSYIFTATGSILLGLVVIAVFKIAHHFRKKEEDQARVEKFLEDYRADKPARFTYADVKRITGGFKEKLGEGAHGAVFRGKLSNEIQVAVKILNNTEGDGNDFINEVGIMGKIHHINVVRLLGFCAEGLHRALVYNLFPNGSLQSFIFPPDDKDRFLGWEKLQHIALGIGKGIEYLHQGCDHPIIHFDINPHNVLLDDNFTPKISDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSFGMLLLEMVGGRKNVDISSAQNFHVLYPDWIHNLVDGDVHIHVEDEGEVKIAKKLAIVGLWCIQWQPVNRPSIKSVIQMLETAEENQLTVPPNPFHSTTSTTTGRLTTTRRPLELEAIQE 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01736 616 MobiDBLite consensus disorder prediction 584 608 - -
Spst8g01736 616 FunFam PR5-like receptor kinase 382 587 - -
Spst8g01736 616 SUPERFAMILY Protein kinase-like (PK-like) 291 578 IPR011009 -
Spst8g01736 616 ProSiteProfiles Protein kinase domain profile. 307 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01736 616 Pfam Protein tyrosine and serine/threonine kinase 309 576 IPR001245 GO:0004672|GO:0006468
Spst8g01736 616 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Spst8g01736 616 Gene3D Transferase(Phosphotransferase) domain 1 382 589 - -
Spst8g01736 616 Pfam Wall-associated receptor kinase galacturonan-binding 38 98 IPR025287 GO:0030247
Spst8g01736 616 MobiDBLite consensus disorder prediction 584 605 - -
Spst8g01736 616 Gene3D Phosphorylase Kinase; domain 1 279 381 - -
Spst8g01736 616 FunFam serine/threonine-protein kinase PBS1-like 273 381 - -
Spst8g01736 616 ProSitePatterns TonB-dependent receptor proteins signature 1. 1 79 IPR010916 -
Spst8g01736 616 PANTHER RUST RESISTANCE KINASE LR10-RELATED 277 594 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01736 Spst-Chr8 20818835 20820774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01736 15 605 Receptor kinase-like Gene Family AT1G66910 33.282 2.53e-100 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst8g01736 PK_Tyr_Ser-Thr 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01736 - - gmx:100811907 895.575