Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01735 ATGTGGAGAGAGAGCGCGTTATTGATGATCCTGCTGTTTCGACTTGAGCAAATTTGTGCAACTAGTAAGCAGGGTCATGCTTGTCCTCCTTCTTCCTGTGGCAAAGTCACCAACATAACGCATCCATTTCGATTAAAAGGCGACCCAGAAAACTGCGGCGACCACAGGTATGAGCTCACCTGTGAAAATAATGTCACGCTATTATCTTTGTACTCCGGAAAATATCTTGTGCAGGCAATCAACTACAATAATTTCACAATCCGAGTGGTTGATCCGGGCGTTCAACAATCAAATTGTTCCAACATTCCTCGCTACTTCTTGTCTCAATCCAATTTCAGGGATTCGTATGCTTACACCGACATGGATGCATACCAAACTAGTCAACCACGATTGTCAAATCAAACATTCTATTTCAATCATGATAGGTTTCACACGGTTAATTCAGAGCCTGTTTTCGAACATATAGTTTTCATGAATTGTAGCCATCCAGTGAGTGACAATCTTAAGTATGTGGATACTGCTCCCTGTGTGAATTGGCACTCCAAAGGCTATATGTTTGCCATTGCTGGTGACTTAATATCAGAGGACTTAGAAGTTGGTTGTCATGTAAAACTGGTTACTCTCACATCTTGGTGGGGTTTGCACGCACATAAATATTCCTACACTGAGATTCACAAAGCACTAGTTTATGGATTTGAGATTTCGTGGATGATTCGCGCCTGCAACGACATTTGTGGAAATTTGGCTAGCTCCTGCAACTGGGACACTTCCGGGTTGGTTGATTGCTCGCTCGATTGCCACAGTTTCCTGGGAATTTTGGATATATGTGGTAAAGGAAATGGTAGACCGATATGGTACCAGCTTCTGTTATATGCAAGAGATACTATATATGGTGTCTGGATAGGTCTGGTTGAAAGAATAAAAGGACATAATACGGGATTTGATGGCAACTATAAATTAGGTTTAATCATAGGACAGTACGTTTTACCATCCTTCTGGGCAGGTAGACTTTTGTTTGGGATGACTTTATTTATTGCACTGTTGATCTACAAATGGAAAAATCGGCATTCATCGATATACGAAAACATTGAAAATTATTTGGAACATGCCAATTTGATGCCCATTAGATATTCATACAAGGAAATCAAGAAAATAACAGGAGGTTTCAAGGACAAGTTGGGTGAAGGAGGATATGGTTCTGTGTTTAAGGGAAAGTTGTCTAGTGGCTCTTGGGTGGCAGTAAAAATGTTAAGTAAATCAAGAGGTGAAGGTCAAGATTTTATTAGTGAAGTTGCAACTATTGGAAAAATATATCATCAAAATATAGTAAAATTGATTGGATTTTGTGTCCAGGGATCAAAACGTGCTCTTGTTTACGAATTCATGTCCAATGGATCTTTGGATAAAATTATTTTTTCTAAAGATGGAAGTGCACATTTAAGCTACGATGAAATATATAATATTTCAATTGGAATAGCTAAGGGGATTGCTTATCTTCACCATGGGTGTGAGATGCAAATTTTGCATTTTGATATCAAGCCTCATAACATCTTGTTAGATGAAAATTTCACCCCAAAAGTCTCTGACTTTGGATTGGCAAAGTTATATCCAATAAATAATAGCATTGCTACAATGACAGGAGCAAGAGGAACAATTGGATATATGGCTCCAGAGTTATTTTACAAAAATATTGGAAGAATATCCCATAAGGCTGATGTTTATAGCTTTGGAATGCTTTTGATGGAGATGACAAACAAAAGGAAAAACCTAAATCCTCATGCAGAGCATTCAAGCCAACTTTACTTTCCACTTTGGATTTATAAGCATATCGGGAAAGAAAAAGATATAGAAATGGAAGATGTTACTCACGAAGAAAAGGAAGTAGCAAAAAAGATGATTATAATTGCACTTTGGTGTATCCAATTAAAGCCAAGTGATCGTCCTTCAATGAACAGAGTAATTGAAATGCTTGAAGGAGATATTGACAATCTTGAAATACCTCCAAAGCCCACTCTCTATCCACATGAAACAATGGCAAGTGATACAAGTTTCACTTTTTCTTCGGATTCTTTCATGTAA 2079 0.3785 MWRESALLMILLFRLEQICATSKQGHACPPSSCGKVTNITHPFRLKGDPENCGDHRYELTCENNVTLLSLYSGKYLVQAINYNNFTIRVVDPGVQQSNCSNIPRYFLSQSNFRDSYAYTDMDAYQTSQPRLSNQTFYFNHDRFHTVNSEPVFEHIVFMNCSHPVSDNLKYVDTAPCVNWHSKGYMFAIAGDLISEDLEVGCHVKLVTLTSWWGLHAHKYSYTEIHKALVYGFEISWMIRACNDICGNLASSCNWDTSGLVDCSLDCHSFLGILDICGKGNGRPIWYQLLLYARDTIYGVWIGLVERIKGHNTGFDGNYKLGLIIGQYVLPSFWAGRLLFGMTLFIALLIYKWKNRHSSIYENIENYLEHANLMPIRYSYKEIKKITGGFKDKLGEGGYGSVFKGKLSSGSWVAVKMLSKSRGEGQDFISEVATIGKIYHQNIVKLIGFCVQGSKRALVYEFMSNGSLDKIIFSKDGSAHLSYDEIYNISIGIAKGIAYLHHGCEMQILHFDIKPHNILLDENFTPKVSDFGLAKLYPINNSIATMTGARGTIGYMAPELFYKNIGRISHKADVYSFGMLLMEMTNKRKNLNPHAEHSSQLYFPLWIYKHIGKEKDIEMEDVTHEEKEVAKKMIIIALWCIQLKPSDRPSMNRVIEMLEGDIDNLEIPPKPTLYPHETMASDTSFTFSSDSFM 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01735 692 ProSiteProfiles Protein kinase domain profile. 387 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01735 692 SMART serkin_6 387 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01735 692 Gene3D Phosphorylase Kinase; domain 1 361 461 - -
Spst8g01735 692 Gene3D Transferase(Phosphotransferase) domain 1 462 665 - -
Spst8g01735 692 FunFam serine/threonine-protein kinase PBS1-like 355 461 - -
Spst8g01735 692 PANTHER RUST RESISTANCE KINASE LR10-RELATED 360 676 IPR045874 GO:0004672
Spst8g01735 692 FunFam PR5-like receptor kinase 462 669 - -
Spst8g01735 692 Pfam Protein kinase domain 390 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01735 692 SUPERFAMILY Protein kinase-like (PK-like) 372 658 IPR011009 -
Spst8g01735 692 Pfam Wall-associated receptor kinase galacturonan-binding 28 91 IPR025287 GO:0030247
Spst8g01735 692 ProSitePatterns Protein kinases ATP-binding region signature. 393 415 IPR017441 GO:0005524
Spst8g01735 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 507 519 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01735 Spst-Chr8 20813522 20818043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01735 372 689 Receptor kinase-like Gene Family AT1G66910 50.617 1.92e-108 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst8g01735 Pkinase 5.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01735 - - gmx:100305367 926.776