Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01733 ATGAAGACGCCAAAACGCCACTCGCCCTCGGCCAACGCCGTCCGGCGAGTGGACCCCGATTCCAGGGAGATTCTCACCGGCTTCAACAACGGTAGCCGGAGGAGGCTCAAAATCCGGAAAATGAAGTACACTTGCCAGGCAAAGATCCGCATCGGGAATGACACCCGCCGCGTGTCCCCGCCGCCGGAGAAAGGGAGGAGAGAGATTCACGAGCACGTCGAGATTTCGCTTTCGCTGGCGACGACGTCGTCGTCGTCGTCATCGGAGGAGGAGGAGCGGTCGGCGGCGGAGAAAAACGACGGCGTTTTGTTGTATGGGTACGCGTCGGTGAGAGGGAGCAGGAAGGAGATGGAGGACGCGGTGAGTGCGGAGATAGCGTTTGCAGCTATGGAGAGAGGAAAGTGCGACTTCTTCGCGGTCTACGATGGCCACGGCGGAGCTCAGGTGGCGGACGCGTGTCGGGGGCGGTCACACCGGCTGGTGGCGGAGGAGATGGAGAGAAGTGAGAATCACGTGGAATGGGACTGGCACCGAGTGATGGAAGGGTGTTTTCGTAAAATGGATGGCGAGGTCGCTGATAATGCGGCCGTCAGGACTGTTGGTTCAACGGCGGTTGTCGCCGTCGTCGCGGCGGAGGAGGTTGTCGTCGCTAATTGCGGTGATTGTAGGGCCGTGTTGGGAAGAGGAGGTGAGGCCTTGGACTTGTCTAGTGATCATAAGCCCGATAGGCCCGACGAGTTGAAGCGAATCGAAGAGGCTGGTGGAAGGGTCATTAACTGGAATGGCCAGCGTGTGCTTGGTGTTCTTGCTACTTCACGATCCATAGGAGATCAGTACCTACGACCTTATGTAATATCAGAACCAGAAGTGACAGTGACCAAGAGAAGCAGCAAGGATGAATTTCTGATACTAGCAAGTGATGGATTGTGGGATGTGATGTCCAGTGAAGTTGCGTGCCAAGTTGTAAGGAAATGCCTGAATGGACAGATAAGGAGAGTGTGCAATGGAGTTGGGAATCATCAAAACCGTGCTACCGAGGCTGCAGGCCTCTTAGCTGAGATTGCATTGGCAAAGGGAAGTAGAGATAACACCAGTGTGATTGTTGTTGAGCTAAGAGGAACAGTAACATGA 1131 0.5535 MKTPKRHSPSANAVRRVDPDSREILTGFNNGSRRRLKIRKMKYTCQAKIRIGNDTRRVSPPPEKGRREIHEHVEISLSLATTSSSSSSEEEERSAAEKNDGVLLYGYASVRGSRKEMEDAVSAEIAFAAMERGKCDFFAVYDGHGGAQVADACRGRSHRLVAEEMERSENHVEWDWHRVMEGCFRKMDGEVADNAAVRTVGSTAVVAVVAAEEVVVANCGDCRAVLGRGGEALDLSSDHKPDRPDELKRIEEAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISEPEVTVTKRSSKDEFLILASDGLWDVMSSEVACQVVRKCLNGQIRRVCNGVGNHQNRATEAAGLLAEIALAKGSRDNTSVIVVELRGTVT 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01733 376 FunFam Protein phosphatase 2C 51 97 376 - -
Spst8g01733 376 MobiDBLite consensus disorder prediction 77 97 - -
Spst8g01733 376 SUPERFAMILY PP2C-like 102 372 IPR036457 -
Spst8g01733 376 Gene3D - 68 374 IPR036457 -
Spst8g01733 376 SMART PP2C_4 93 369 IPR001932 -
Spst8g01733 376 ProSiteProfiles PPM-type phosphatase domain profile. 104 371 IPR001932 -
Spst8g01733 376 CDD PP2Cc 105 371 IPR001932 -
Spst8g01733 376 PANTHER PROTEIN PHOSPHATASE 87 371 IPR015655 GO:0004722|GO:0006470
Spst8g01733 376 Pfam Protein phosphatase 2C 106 364 IPR001932 -
Spst8g01733 376 SMART PP2C_SIG_2 121 371 IPR001932 -
Spst8g01733 376 ProSitePatterns PPM-type phosphatase domain signature. 137 145 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01733 Spst-Chr8 20807724 20810482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01733 105 372 PP2C-type Phosphatase Gene Family AT2G29380 52.098 4.11e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01733 K14497 - gmx:100807235 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01733 8 20807724 20810482 Spst8g01733 8 20807724 20810482 ECH