Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01732 ATGGGTCGTTTAACAGAGTCGAAGTTGGTTCAAGACCTGGTTCTGTACGCAGCAAGTGCAGCACTCAGTTACCTGGTCTTGTTCGTTGGCCTCCGACAACTTGATCCGAATCGCGAGGCATCCAAAAAGGCCCTTCACCACAAGAAAGAGATAGCCAAGCGTCTCGGTCGTCCTCTCGTTAACACAAACCCTTATGAGGATATCATAGCATGCGATGTCATCAATCCTGATCACATTGATGTGGAGTTTAATTCAATTGGAGGACTGGAATCGATAAAGCAAGCTCTGTTTGAGCTTGTTATTCTGCCTCTAAAAAGGCCTGACTTGTTTTCTCATGGTAAACTTCTTGGGCCACAAAAGGGTGTCCTGTTGTATGGACCACCTGGCACAGGGAAGACCATGCTTGCCAAAGCTATTGCTAAGGAGTCTGGAGCTGTTTTCATCAATGTGAGGATATCAAACCTCATGAGCAAGTGGTTTGGAGATGCCCAGAAACTTGTGGCTGCCATATTTAGCCTAGCTTATAAGCTCCAGCCTGCCATCATATTCATTGATGAAGTTGACAGCTTTTTGGGTCAGCGTCGAACAACAGATCATGAGGCTTTGTTAAACATGAAAACTGAATTCATGGCCTTATGGGATGGTTTTACTACTGATCAGAAAGCTCAAGTTATGGTCCTTGCTGCCACTAATCGTCCTTCAGAACTTGATGAAGCCATACTTCGACGTTTTCCTCAAGCATTTGAAATTGGCATGCCGGACCAAAGGGAGAGGGCTGACATATTGAAAGTTATCTTGAAGGGTGAGAGGATTGAAGAAAACATTGACTTTGATCATATAGCTTACTTATGTGAAGGTTACACTGGTTCGGATCTATTTGACCTGTGCAAGAAAGCTGCCTATTTTCCAATCAGAGAACTGCTGGATGAAGAGAAGAAAGGGAGAAGTTCTTCTGCTCCTAGACCACTGTCCCAGCTAGACTTCGAGAAGGCCCTGGCCACTTCACGAAAGACTACTGTTGCTGCATTTGAATACAATGGCTTAAGTGCAGGGCACGGGGAAGCTGGTGGTGATTATCAGGTTCAAGCTGCAATAAATGAACTCTCTAAGTTTGTGGTATCTCACGTGATTAATCGCCAGCCAGATGCCAAAGATCTTTAA 1161 0.4479 MGRLTESKLVQDLVLYAASAALSYLVLFVGLRQLDPNREASKKALHHKKEIAKRLGRPLVNTNPYEDIIACDVINPDHIDVEFNSIGGLESIKQALFELVILPLKRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAIFSLAYKLQPAIIFIDEVDSFLGQRRTTDHEALLNMKTEFMALWDGFTTDQKAQVMVLAATNRPSELDEAILRRFPQAFEIGMPDQRERADILKVILKGERIEENIDFDHIAYLCEGYTGSDLFDLCKKAAYFPIRELLDEEKKGRSSSAPRPLSQLDFEKALATSRKTTVAAFEYNGLSAGHGEAGGDYQVQAAINELSKFVVSHVINRQPDAKDL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01732 386 Gene3D - 253 333 - -
Spst8g01732 386 Pfam AAA+ lid domain 274 310 IPR041569 -
Spst8g01732 386 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Spst8g01732 386 CDD RecA-like_ATAD1 85 250 - -
Spst8g01732 386 SMART AAA_5 118 254 IPR003593 GO:0016887
Spst8g01732 386 Gene3D - 80 338 IPR027417 -
Spst8g01732 386 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 8 342 - -
Spst8g01732 386 FunFam ATPase family AAA domain-containing protein 1 80 257 - -
Spst8g01732 386 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Spst8g01732 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 311 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01732 Spst-Chr8 20797625 20803663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01732 39 325 Calmodulin-binding Proteins AT3G56690 33.562 6.35e-39 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01732 K22530 - gmx:100791694 691.419