Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01726 ATGTTTGCGGAGACAGGACTTCTGTTCCCATATTTTCGGAATTTCTCTCAAGAGTTTCAACAACTTGAGGAATACTGCATGACCCAGAAGTCCAATGCTTCAATGAATGACCTTGTTCAATCTTCCTCTGCAATCTCAGACTATGATTTGTTAATAGAGGGAGATCTGTTCAAAGCACCTGAACCTATTATTGAAGAACCAGCAATGGACCTCGATCTCGTGCAAGCAGACATCTCAATGATATCTTGTGGGGAGGATGTCTCCTCACAGGGTCTAAAATCATCAGATATTGATGTACTTCAAAATGAACAGCTTCTCAGTGAGGTATTCTACGAGTGCAAAAAGGATCTCTTAGAAAAGACAGTGATAGAGTCACCACTCTCAGATATTATGGAAATCAAGGTTCCAGCTCTGAACATTGAGGAGAATTCAGTTCAAGTAAACAAACCATTTCCTCACATGACTCTACCAAAGAGTATCAGTTCAGGAAGCCTGAGTTCAATGGACTGGATGCATGGAGCTGCAATGAAGCCTGCTTTTCTGGATTTCCCGGGAATAGATTTCAATGAAGTTTATGGCATGCGGAGAGCTTTTAGCGAAGGAGATATAAAGACTCTTAGTACTGGCAACACGAGCTTTAGCCAATGTACCCAGGAGAGGCCTTTTCTTCTCAGCAACTGCACAAGTGAGGAACGACAGGAAAAGCTTTCCAGATACAGAAATAAGAAGACAAAGAGAAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAAGCACTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGACAGAAGAGTTAGATGTGAAGAGGCAATGA 849 0.4181 MFAETGLLFPYFRNFSQEFQQLEEYCMTQKSNASMNDLVQSSSAISDYDLLIEGDLFKAPEPIIEEPAMDLDLVQADISMISCGEDVSSQGLKSSDIDVLQNEQLLSEVFYECKKDLLEKTVIESPLSDIMEIKVPALNIEENSVQVNKPFPHMTLPKSISSGSLSSMDWMHGAAMKPAFLDFPGIDFNEVYGMRRAFSEGDIKTLSTGNTSFSQCTQERPFLLSNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEELDVKRQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01726 282 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
Spst8g01726 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 156 275 IPR045281 GO:0009909
Spst8g01726 282 Pfam CCT motif 232 274 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01726 Spst-Chr8 20741479 20744742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01726 228 278 C2C2-CO-like Transcription Factor Family AT5G57660 49.020 9.26e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst8g01726 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01726 - - aprc:113853022 464.536