Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01716 ATGGAGAGGGTCATCGGAGGAAAGTACAAAATCGGTAAAAAAATTGGGAGCGGATCGTTCGGTGAAATTCACATTGGGGCACATATCGAGACTTGTGAAATGGTAGCCATCAAAATGATTCTGATTCCACATAATTATGAAATTGAAGGTGGTTTTCCAAGAATGAAATGGTGTGGTACTGATGGAGACAATAATGTTCTTGTTATTGAACTTCTGGGACCGAGTCTTGAAGATTTCTTTTTCTTCTGTGGGAGTAAATTATCACTCAAAACAGTTTTGATGTTGGCTGATCAGATGCTTGCTCGGATAGAGTATTTGCACTCTAAAGGATTTTTGCATAGAGACATCAAACCGGATAACTTCCTTATGGGTCTTGGGAAGAAAGCAAATCAGACACTTTGCAAGTCATATCCTGTGGAGTTTGCTTCTTACTTTCACTATTGTCGCTCTTTGACATTTGATCAACTACCAGATTATGGGCTTTTGAAACGTCTATTTCGTAATTTGTTCACTCGTGCAGGGTGGCATTGCATGGCTCCACTGGCTGTGCCTACCAGTATTGAACCAGTGGATGAGGATAATCATAAAGGTAACTCCAGTCTTGTATCAAGAGTTGTCAATGGCTCCACTCAAATTGCTGCAGAAACACCATCAATCAAAGTTGACCATCAACGTGTTTTCAAAACAACGGCATCTAATGTTCAGAATCATAATGCCAAGATTCCAACAGAGAAACATACTGTGAACAATGGTTCATCTATGTCTACTGCTATGCCAAGAGTATCCACAGAAAATGTGTCAAAACCAGTAAGGCAAGTAGGAACATCAAACGTGGGTCATCATGGAATTGGGAGTAAGACTGGTCGTTCAGGAAACATTGTTCCTTCACTACGCCGAGTTTCATCAACAAAACAATAG 918 0.4031 MERVIGGKYKIGKKIGSGSFGEIHIGAHIETCEMVAIKMILIPHNYEIEGGFPRMKWCGTDGDNNVLVIELLGPSLEDFFFFCGSKLSLKTVLMLADQMLARIEYLHSKGFLHRDIKPDNFLMGLGKKANQTLCKSYPVEFASYFHYCRSLTFDQLPDYGLLKRLFRNLFTRAGWHCMAPLAVPTSIEPVDEDNHKGNSSLVSRVVNGSTQIAAETPSIKVDHQRVFKTTASNVQNHNAKIPTEKHTVNNGSSMSTAMPRVSTENVSKPVRQVGTSNVGHHGIGSKTGRSGNIVPSLRRVSSTKQ 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01716 305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 111 123 IPR008271 GO:0004672|GO:0006468
Spst8g01716 305 Pfam Protein kinase domain 62 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01716 305 MobiDBLite consensus disorder prediction 244 305 - -
Spst8g01716 305 SMART serkin_6 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01716 305 Gene3D Transferase(Phosphotransferase) domain 1 1 130 - -
Spst8g01716 305 Gene3D Transferase(Phosphotransferase) domain 1 131 240 - -
Spst8g01716 305 PANTHER CASEIN KINASE-RELATED 130 237 - -
Spst8g01716 305 ProSiteProfiles Protein kinase domain profile. 9 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01716 305 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Spst8g01716 305 SUPERFAMILY Protein kinase-like (PK-like) 5 175 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01716 Spst-Chr8 20444000 20459696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01716 8 123 MAP Kinase Kinase Kinase AT3G06030 29.496 8.09e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Spst8g01716 Pkinase 4.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01716 K08960 - gmx:100782913 243.047