Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01697 ATGTTCATAGGGGAGGGGAAGGGCAAAACTGTGATTACAGGGAAAAAGAATGTGATCGATGGCATGACCACATTCCACTCTGCATCCTTCGCTGCTAGTGGAGCTGGATTCATTGCACGAGACATCACCTTCGAGAACTATGCCGGACCGGCGAAGCACCAAGCGGTGGCGCTCCGTGTCGGAGCAGACCACGCGGTGGTGTACCGGTGCAACATTGTGGGGTACCAAGACTCATGCTACGTCCACTCTAACCGTCAATTTTTCCGTGAATGTGACATTTACGGTACTGTAGACTTCATATTCGGCAATGCTGCGGTGGTTTTCCAGAAGTGCAACATTTATGCTCGCAAGCCCATGGCCCAGCAGAAGAACACAATCACGGCCCAAAATAGGAAAGACCCAAATCAGAATACGGGGATATCCATGCATGATTGTCGGATCCAACCCGCCCCAGATCTTGCCCCTGTTAAGGGCAGCTTCCCCACCTATTTGGGCCGTCCATGGAAGCAGTATTCTAGAACAGTGTATTTGTTATCCTACATGGGTGACCATATACATCCTCGTGGATGGTTGGAGTGGAATGGAAACTTTGCTTTGGACACATTGTATTATGGTGAGTACATGAATAATGGGCCCGGTGCAGCAGTGGGCCAACGGGTCAAATGGCCCGGGTACCGGGTCATTACATCTACTGTGGAGGCAAATCGGTTCACCGTGGCCCAGTTTATATCCGGGTCGGCCTGGTTACCGTCCACCGGAGTGGCCTTTGCAGCCGGATTATCCACATGA 789 0.5158 MFIGEGKGKTVITGKKNVIDGMTTFHSASFAASGAGFIARDITFENYAGPAKHQAVALRVGADHAVVYRCNIVGYQDSCYVHSNRQFFRECDIYGTVDFIFGNAAVVFQKCNIYARKPMAQQKNTITAQNRKDPNQNTGISMHDCRIQPAPDLAPVKGSFPTYLGRPWKQYSRTVYLLSYMGDHIHPRGWLEWNGNFALDTLYYGEYMNNGPGAAVGQRVKWPGYRVITSTVEANRFTVAQFISGSAWLPSTGVAFAAGLST 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01697 262 FunFam Pectinesterase 1 260 - -
Spst8g01697 262 PANTHER PECTINESTERASE 1 250 - -
Spst8g01697 262 ProSitePatterns Pectinesterase signature 2. 93 102 IPR033131 -
Spst8g01697 262 Gene3D - 1 260 IPR012334 -
Spst8g01697 262 SUPERFAMILY Pectin lyase-like 1 259 IPR011050 -
Spst8g01697 262 Pfam Pectinesterase 1 245 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01697 Spst-Chr8 20138684 20140537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01697 1 261 Carbohydrate Esterase AT5G53370 80.077 1.66e-162 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01697 - - gmx:106796002 519.235