Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01696 ATGACCCTGCGTCACGTCAGCCGAGCGTTCTTCGCCTCCACCGGCCTCTCCTTCGCCGCCACCGAACCCAAAGTTCGCGCCGCCTACGACGATTGCCTCGAGTTATTGGAGGAGTCGATGGACGCGCTCTCGCGATCCCTCGACTCCATTCTCTCACCCTTGGAGATTTCCAATGGCGCTGTCGGATCCACCGACGACGTGATAACGTGGCTCAGCGCCGCGCTCACTAATCATGACACGTGTGCGGAGGGGTTTGAGGACACGAGCGGGAGCATGAAGGACCAGATGGTTGATAACTTGAAGGACTTGTCTGAACTCGTGAGCAATTGTCTCGCGATATTCTCGGCGAGCGGAAGTGGCGATTTCTCGGGGGTGCCGATTCAGAACAAGAGACGATTAATGGAAGAGGAAGAAGAAGAAGATGAAGAAACTGAAGGGAATGTTAACGGCGATATCCCGGGGAAATTCCCGAGATGGTTGAATAAACGTGATAGAAGATTATTGAGTTTACCAGCGTCGGCAATTCAAGCAGATATAATCGTATCTAAGAATGGTAACGGAACGGTGAAGACAATTGCCGAAGCGATTAAGAAAGCTCCAGAACATAGTACTCGTCGGTTCATCGTCTTCGTGAGGGCAGGAAGGTAA 648 0.5216 MTLRHVSRAFFASTGLSFAATEPKVRAAYDDCLELLEESMDALSRSLDSILSPLEISNGAVGSTDDVITWLSAALTNHDTCAEGFEDTSGSMKDQMVDNLKDLSELVSNCLAIFSASGSGDFSGVPIQNKRRLMEEEEEEDEETEGNVNGDIPGKFPRWLNKRDRRLLSLPASAIQADIIVSKNGNGTVKTIAEAIKKAPEHSTRRFIVFVRAGR 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01696 215 Coils Coil 127 147 - -
Spst8g01696 215 PANTHER PECTINESTERASE 9 214 - -
Spst8g01696 215 SUPERFAMILY Pectin lyase-like 173 214 IPR011050 -
Spst8g01696 215 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 117 IPR035513 -
Spst8g01696 215 NCBIfam pectinesterase inhibitor domain 2 114 IPR006501 GO:0004857
Spst8g01696 215 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 115 IPR035513 -
Spst8g01696 215 Gene3D - 122 215 IPR012334 -
Spst8g01696 215 MobiDBLite consensus disorder prediction 133 152 - -
Spst8g01696 215 Pfam Pectinesterase 178 214 IPR000070 GO:0030599|GO:0042545
Spst8g01696 215 Pfam Plant invertase/pectin methylesterase inhibitor 22 113 IPR006501 GO:0004857
Spst8g01696 215 SMART PMEI_2 1 113 IPR006501 GO:0004857
Spst8g01696 215 CDD PMEI-like_3 2 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01696 Spst-Chr8 20137651 20138298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01696 1 215 Carbohydrate Esterase AT3G49220 56.221 4.33e-73 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01696 - - gmx:106796002 339.347