Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01688 ATGGATCGTAAAAGACCATATTATTACCTTCTAATGCTCTCTGTGTTGGCCATTTGTTTTGTGCCATCGTTGGGAGACACAAATGCTCAAATTTTGATGAGGTTCAAAGTTTCCTTGTCAAATGGCAATGCCTTAAACGACTGGGGAAACGAGTCTAGTTTATGTAGCTGGACTGGCATGTTATGCCGCGCTGACCAAACATTTTATGGCTTGAGACTAGAACACATGGGACTAGGTGGGAAGATTGATGTAGAAACCTTGTTTGAATTGCCAACTTTGGTAAGTTTTAGTGTCATTAACAATACGTTTGAGGGTCCAATGCCTGAGTTCAAAAAGCTTGTGAAGTTAAGGGCATTGTTTCTGTCTAATAACAAGTTCTCTGGTGATGTTCCGGATGATGCTTTTGAGGGCATGAGAAGACTGAAAAGGGTATTCTTAGCAGAAAATGGCTTCACTGGTCATATTCCTAAGTCACTTGCTAACTTACCTAGACTCTTGGATTTGGACTTACGTGGGAATGGTTTTGGAGGAAACATACCAGAATTTCAACAGAAGGATTTCAGAGTGTTTAATCTGTCTTATAACCAATTGGAGGGTCCAATACCAGAAAGCTTAAGCAACAAAGATCAAAGTTCATTTGCTGGCAACAAAGGCCTATGTGAAAGGCCTATGAGTTCTTGCAGTCATATTCGCGGCAACGAACCTAGATCAGAGGATATCTTCCCTGAACATCAAAGAAAGGGAAGGAAATTCAAAATTCTTATAATAGTCATTATAGTGGTGGCAGTGGTTGTTTTTGCTTCAATGGTGGCACTTCTATTTATTCATAACCACAGGAGAAAAAGGTTGCAACCTGGAATAGTAGCCAAGCAGGGAAATTCCCAGAAAAATAATGCAGGCTTCAAGGAGTCACAATCCGTTGATCTGACAAGTGATGTCAAGGATGGTGATGGCCAACTGAACTTTGTCAGGGAAGACAAAGGGGGATTTGATTTGCAAGACCTGCTTAGTGCCTCAGCTGTGGTTCTTGGTAGTGGCAGTTTCGGGTCCACTTACAAGGCTGTGGTTTTGAATGGACCAACAGTGGTTGTGAAGAGGTTTAGGCATATGAACAATGTTGGGAAACAAGAGTTCAATGAGCACATGCAAAGGCTTGGAAGCTTAACACACCCTAATCTTCTCCCTCTTGCAGCATTCTACCACAGAAATGAAGATAAGTTCTTGGTTTATGACTTCGCTGAAAATGGCAGTTTGGCCAGTCATCTACATGGCAGAAATGGCTCTGTGCTGACCTGGTCCACCCGTTTGAAGATCATAAAAGGGGTGGCTAGGGGCTTAGCCTACCTCTATGAAAACTTCCCAGAGCAAAACCTACCTCATGGTCATCTCAAGTCCTCTAATGTGGTTCTGGATCATTCATTTGAACCACAGTTGACTGAGTATGGTCTTGTGGCAGTGATGAGCAACAGCCATGCTCAGAAGTTCATGGCAGCCTACAAGGCCCCAGAGGTGAGCCAATTTGGCAGGCCAAATATGAAAAGTGATGTGTGGTGTCTGGGGATCCTCATTCTGGAGCTGCTGACAGGGAGGTTTCCAGCAAACTACCTGAGACATGGGAAGGGTGGGAACAATGCTGACTTGGCAACATGGGTTGATGCAGTTGTGAGGGAAGAGTGGACTGGTGAGGTGTTTGATAAGGACATCTTGGGGACTAGGAATGGGGAGGGTGAGATGCTGAAGCTGCTGAGGATTGGGATGTTTTGCTGCAAATGGAGTGTTGAGAGTAGGTGGGTTTGGAGGGAGGCAGTGGCCAAGATTGAGGAGGTAAAGGAGAAGGATGGTGAAGATGATTCTTCTTCTTATGTCAGTGAAGGAGATTTGAATTCAAAGACTATGACTGAAGATGAATTCTCTTTCTCTGTCACTAGTTGA 1932 0.4389 MDRKRPYYYLLMLSVLAICFVPSLGDTNAQILMRFKVSLSNGNALNDWGNESSLCSWTGMLCRADQTFYGLRLEHMGLGGKIDVETLFELPTLVSFSVINNTFEGPMPEFKKLVKLRALFLSNNKFSGDVPDDAFEGMRRLKRVFLAENGFTGHIPKSLANLPRLLDLDLRGNGFGGNIPEFQQKDFRVFNLSYNQLEGPIPESLSNKDQSSFAGNKGLCERPMSSCSHIRGNEPRSEDIFPEHQRKGRKFKILIIVIIVVAVVVFASMVALLFIHNHRRKRLQPGIVAKQGNSQKNNAGFKESQSVDLTSDVKDGDGQLNFVREDKGGFDLQDLLSASAVVLGSGSFGSTYKAVVLNGPTVVVKRFRHMNNVGKQEFNEHMQRLGSLTHPNLLPLAAFYHRNEDKFLVYDFAENGSLASHLHGRNGSVLTWSTRLKIIKGVARGLAYLYENFPEQNLPHGHLKSSNVVLDHSFEPQLTEYGLVAVMSNSHAQKFMAAYKAPEVSQFGRPNMKSDVWCLGILILELLTGRFPANYLRHGKGGNNADLATWVDAVVREEWTGEVFDKDILGTRNGEGEMLKLLRIGMFCCKWSVESRWVWREAVAKIEEVKEKDGEDDSSSYVSEGDLNSKTMTEDEFSFSVTS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01688 643 Pfam Protein kinase domain 342 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01688 643 SUPERFAMILY L domain-like 39 208 - -
Spst8g01688 643 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Spst8g01688 643 ProSiteProfiles Protein kinase domain profile. 337 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01688 643 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 616 IPR046959 -
Spst8g01688 643 Gene3D Phosphorylase Kinase; domain 1 309 412 - -
Spst8g01688 643 SUPERFAMILY Protein kinase-like (PK-like) 342 606 IPR011009 -
Spst8g01688 643 FunFam Pollen receptor-like kinase 1 413 620 - -
Spst8g01688 643 MobiDBLite consensus disorder prediction 621 643 - -
Spst8g01688 643 MobiDBLite consensus disorder prediction 288 306 - -
Spst8g01688 643 Pfam Leucine rich repeat N-terminal domain 29 62 IPR013210 -
Spst8g01688 643 MobiDBLite consensus disorder prediction 610 643 - -
Spst8g01688 643 Gene3D Ribonuclease Inhibitor 26 134 IPR032675 -
Spst8g01688 643 Gene3D Transferase(Phosphotransferase) domain 1 413 630 - -
Spst8g01688 643 MobiDBLite consensus disorder prediction 286 306 - -
Spst8g01688 643 Gene3D Ribonuclease Inhibitor 135 231 IPR032675 -
Spst8g01688 643 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 84 179 - -
Spst8g01688 643 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01688 Spst-Chr8 19996406 20000246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01688 7 640 Receptor kinase-like Gene Family AT5G35390 45.317 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst8g01688 Pkinase 2.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01688 - - gmx:100781593 1031.94