LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst8g01686	ATGTGGCTACAAAAGAATCATTGGGACAAGAAGGATGGGGTGAATGGAATAGTGGCAGTGGCAATAGACTCAGACAAGGGGAGCCAGAACGCACTAAAATGGTCAGTTGATCATCTCCTCACCAAAGGGTCAAGTGTAGTTCTCATTCACGTCAAGCAAAAGCCATCTTCTCTTTCTGCATCAGTTTCTCTTATGAACCATAGGGGGAATGGTATTTCTGAGCATGGACTTGTCTGCAGAGACCCTGATGACCAAACCAAAGAAATTTTCCGTCCATACCGTGTATTCTGTGCAAGGAAAGATATACACTGCAAGGACATCGTGCTAGAAGATGTAGATATAGCCAAAGCTTTAATTGAATATGCTTCTCAATATGCAATTGAGCATTTAGTCATAGGCTCTTCAAACAAAGGTGGTTTTCTTAGAAGATTCAAGATAGCAGATATTCCAGGAACAGTGTCAAAAGGGGCACCAGATTTCTGCACGGTATATATTGTTGCTAAAGGGAAGATTCAATCCATGCGATCTGCTTCACGTGCTGGTCCAGCCTTTTCCCCTCTTCAAAGCCAACTGAATCAACCCAGTGCCAAATTAGACCTGTCAGAACCACGTGTGCCTCTGTCTAAAGTGCCTGACAGGAGGTCTATGGACGTACCATTCCGTGGATCACATGATGGAATGGATTCCTTCAGGTCACCATTGACTAGGAGAAGTATGAATATTGATAAGTCATTTGGGGAAAATTCGATGCCAGAGACTGACATAAGTTTTGTAAGCTCTAGAATGTCAAGTACAGATCGGTTATTCCCTTCATTGCATAACATCTACAACAATAGCAACTCAGAGACAGGAATGTCCAATCCCCGGCTATCATATAGCTCTGACACCGATGGAAACAATTATAGCTTTGAGTCAGTGAATTTTGGAAGGAGGTCTGTGGATATCAGCTCCGATTTCTCATCCTTCTCACAAGAGAGTGAGGGCTTCTCAGCCTCATCACAGGGCATGGATGATGTGGAGGCTGAAATGAGAAGACTGAAATTGGAGCTCAAGCAAACAATGGAAATGTATAGCAATGCCTGCAAAGAAGCACTCACAGCACAGCAAAAGGCTGTGGAACTCCAGCGCTGGAAATTAGAGGAAGAGAGAAGATTAGAGGAGGCAAGGCTCGCAGAAGAAGCTGCATTGGCCCTTGCAGAAAGGGAGAAGGCAAGATCAAAAGTAGCCATGGAGACAGCTGAGGCACAGAAGAGGATTGCAGAACTGGAATCACAGAAGAGAATCAATGCAGAAATGCAAGCATTTAGAGAAACAGAAGAGAAAAGAAAAGCAATGGATGCTTTGACAAACCATGGTTTGAGGTATAGAAGGTACACAATTGAGGAGATTGAAGCTGCCACAAATTTTTTTACCGAGTCACAGAAGATTGGAGAAGGGGGTTATGGTCCAGTATTTAAGTGCCTTCTGGACCATACATCTGTGGCAGTGAAGGTTCTACGTCCTGACGCAGCACAAGGAAGGTCACAGTTTCAAAGAGAGGTTGAGGTACTGAGTTGCATTCGGCATCCAAACATGGTTCTCCTCCTAGGAGCCTGCCCTGAGTATGGCTGCCTGGTGTATGAGTACATGGCCAATGGAAGCTTAGACGACTGCCTCTTCTGCCGAAGAAACTCACCCCCAATTTCATGGCAGCTCAGGTTCAAAATTGCAGCTGAAATTGGCACAGGATTGTTGTTCCTCCACCAAACCAAACCTGAGCCTCTAGTACATAGAGACCTTAAACCAGCGAACATCTTGTTGGACAGAAACTATGTGGCCAAGATCAGTGACGTAGGTTTGGCCAGGCTGGTTCCACCCTCAGTTGCAGACACTGTGACACAGTATAGGATGACATCGGCTGCTGGAACATTTTGTTACATAGACCCTGAGTACCAGCAGACAGGAATGCTGGGAGTGAAATCTGACATATACTCTCTTGGGATCATTTTCCTGCAAATTTTGACAGCAAAACCTCCAATGGGCTTGACTCATCATGTTGAGAGAGCCATTGAGAAGGGAACATTTGTTGATTTGTTGGATCCAAAAGTACCAGACTGGCCAATAGAGGATACCTTGAACTTTGCAAAGATTGCTATCAGATGTGCTGAACTGAGGAGGAGAGACAGGCCTGATCTTGGCAAGGAAGTGCTGCCTGAACTAGAAAGGCTAAGAGAACTTGCTGAGAACAATGATCACTATTCAATGTTTGGTTGCTATATTAGCCCATCCAATCAGAGCGAAGTTTCTCTTCAACTGGATGAACCCAGTTCTCCACTTGCTTATTCTGGAGAGAGCTTGAAAAACCCATCAAGTCCTGTTTGA	2361	0.4473	MWLQKNHWDKKDGVNGIVAVAIDSDKGSQNALKWSVDHLLTKGSSVVLIHVKQKPSSLSASVSLMNHRGNGISEHGLVCRDPDDQTKEIFRPYRVFCARKDIHCKDIVLEDVDIAKALIEYASQYAIEHLVIGSSNKGGFLRRFKIADIPGTVSKGAPDFCTVYIVAKGKIQSMRSASRAGPAFSPLQSQLNQPSAKLDLSEPRVPLSKVPDRRSMDVPFRGSHDGMDSFRSPLTRRSMNIDKSFGENSMPETDISFVSSRMSSTDRLFPSLHNIYNNSNSETGMSNPRLSYSSDTDGNNYSFESVNFGRRSVDISSDFSSFSQESEGFSASSQGMDDVEAEMRRLKLELKQTMEMYSNACKEALTAQQKAVELQRWKLEEERRLEEARLAEEAALALAEREKARSKVAMETAEAQKRIAELESQKRINAEMQAFRETEEKRKAMDALTNHGLRYRRYTIEEIEAATNFFTESQKIGEGGYGPVFKCLLDHTSVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFCRRNSPPISWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADTVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKPPMGLTHHVERAIEKGTFVDLLDPKVPDWPIEDTLNFAKIAIRCAELRRRDRPDLGKEVLPELERLRELAENNDHYSMFGCYISPSNQSEVSLQLDEPSSPLAYSGESLKNPSSPV	786

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst8g01686	786	Gene3D	Transferase(Phosphotransferase) domain 1	543	752	-	-
	Spst8g01686	786	Gene3D	Phosphorylase Kinase; domain 1	438	542	-	-
	Spst8g01686	786	MobiDBLite	consensus disorder prediction	182	233	-	-
	Spst8g01686	786	Gene3D	HUPs	17	166	IPR014729	-
	Spst8g01686	786	MobiDBLite	consensus disorder prediction	206	221	-	-
	Spst8g01686	786	ProSiteProfiles	Protein kinase domain profile.	470	736	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst8g01686	786	SUPERFAMILY	Protein kinase-like (PK-like)	451	725	IPR011009	-
	Spst8g01686	786	Pfam	Universal stress protein family	18	144	IPR006016	-
	Spst8g01686	786	Coils	Coil	336	425	-	-
	Spst8g01686	786	MobiDBLite	consensus disorder prediction	760	786	-	-
	Spst8g01686	786	Pfam	Protein kinase domain	470	722	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst8g01686	786	FunFam	U-box domain-containing protein 51	543	743	-	-
	Spst8g01686	786	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	18	144	-	-
	Spst8g01686	786	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	588	600	IPR008271	GO:0004672\|GO:0006468
	Spst8g01686	786	SMART	serkin_6	470	736	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst8g01686	786	MobiDBLite	consensus disorder prediction	182	197	-	-
	Spst8g01686	786	CDD	STK_N	17	169	-	-
	Spst8g01686	786	PANTHER	OS02G0152300 PROTEIN	18	755	-	-
	Spst8g01686	786	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	442	542	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst8g01686	Spst-Chr8	19960720	19966117	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst8g01686	1	775	Receptor kinase-like Gene Family	AT1G78940	54.956	0.0	775

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Spst8g01686		Pkinase	4.7e-41	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst8g01686	-		-	gmx:100779981	1184.09