Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01677 ATGGAAGGTTCTAGAATAGAGAATTTAATCAGAGCTGAGAAATCGCTGAGGCTCAGCTTAGAGAAATCGAAGTCGGTAGGGTTAGCGTTGGAGAGAGCGGGGCCGAGGTTAGCCGAAATCAGGCAGCGGCTGCCGTCGCTGGGATCGGCGGTGCGGCCTATTCGCGCCGAGAGGGATGCCCTTGCGGCCGTCGGCGGCCACATCAACCGTGCTGTGGGCCCCGCCGCGGCGGTGCTCAAGGTTTTTGACGCCGTCCACGGCCTCGAAAAGTCTCTGTTGTCGGATCCCCGGAGCGATATCGCTGGGTACTTGTCGGTGCTGAAGCGCCTCCAGGAGGCGCTGAGGTTTTTGGGGGACAATTGCGGGTTGGCCATACAGTGGTTGGAGGACATAGTTGAGTATTTGGAAGACAATTCCGTTGCTGATCAGGTTTATCTCGCAAATTTGAAGAAGGAACTTAAGAATCTTCGCGAATCGCAGCACGGGGAACTCGATGGTGGGTTGTTGGATGCTGCATTGTGCAAGTTGGAGGATGAGTTCAGGTTGCTGTTGACTGAGAATAGCGTGCCATTGCCGATGTCGGTGGCGGCCGCAGGTGATGATTTGGCGTGTATTGCGCCGTCGCCGTTGCCGGTGTCGGTTGTGCACAAGTTGCAGGCGATTCTGGGGCGGTTGATTGCCAATGACAGGCTGGATAGGTGTGTGGGGATTTATGTTGAGGTGAGGAGTTCCAATGTTAGGGCAAGTTTGCAGGCGCTGAATTTGGATTACCTTGAGATTTCTGTGTCGGAGTTCAATGATGTGCAGAGCATTGAGGGGTATATTGCTCAGTGGGGGAAGCATTTGGAGTTTGCGGTGAAGCATTTGTTTGAGGCTGAGTATAAGCTTTGCAATGATGTGTTCGAGAGGATTGGATTGGATGTGTGGATGGGTTGCTTTTCGCAGATAGCCGCGCAGGCTGGTATACTGGCGTTTCTTCAGTTTGGGAAGACGGTTACTGAGAGTAAGAAGGACCCCATTAAGCTTTTGAAGTTGTTGGATATTTTCGCGTCGCTCAGCAAGTTGAGGTTGGATTTCAACCGGCTTTTTGGGGGTGCGCCATGTGTTGAGATACAGAATTTGACTAGGGATCTTATTAAAAGGGTGATTGATGGGGCTGCGGAGATTTTCTGGGAGCTTTTTGTTCAGGTGGAGTTGCAGAGGCCGAATCCACCACCTGTGGATGGCAATGTGCCGAGATTGGTGAGCTTTATCACCGATTACTGTAACAAGCTCCTTGGGGAGGATTATAAGCCGATATTGACTCAGGTCCTGATCATTCACAGAAGTTGGAAGCGCCAAAGCTTTCAGGAGAGAGTCCTTGTTACTGAGATTTTGAACATTGTGAAGGCTGTTGAGCAGAATGTGGAGACTTGGATCAAGGCTTATGACGATCCTATACTGTCCCACTTTTTTGCTATGAACAATCACTGGCATCTATGCAAGCATTTGAAAGGGACAAAGCTTGGGGAGCTCTTGGGGGATTCCTGGCTAAGGGAGCACGAACAGTATAAGGACTATTACTCCACAATCTTCTTGAGGGACAGCTGGGGAAAGCTTCCTGGACATTTGAGTAGGGAAGGTTTGATTCTTTTCTCTGGAGGGCGTGCCACAGCCCGGGACCTGGTCAAGAAGAGGTTGAAGAAGTTCAATGAAGTTTTTGATGAGATGTATACTAAGCAGTCAAGTTGGATCATGCCGGAACGGGATCTGAGGGAGAAGACATGTCAGCTTATAGTGCAAGCTGTGGTGCCTGTGTACCGCAGTTACATGCAGAATTATGGTCCTTTGGTTGAGCAAGATGCTAGCTCTACAAAATATGCGAAGTACACTGTGCAGAAGCTTGAGGAAATGCTCTTGTGTCTTTATCGGCCAAGGCCTGTAAGACATGGCAGCTTGAGAAGTCCAACATTTAGTGCAAAATATGGCAATGGAGTACCTGATCTTCGCAGAACCGCATCTGCAGTTGTGTAA 2013 0.4998 MEGSRIENLIRAEKSLRLSLEKSKSVGLALERAGPRLAEIRQRLPSLGSAVRPIRAERDALAAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRSDIAGYLSVLKRLQEALRFLGDNCGLAIQWLEDIVEYLEDNSVADQVYLANLKKELKNLRESQHGELDGGLLDAALCKLEDEFRLLLTENSVPLPMSVAAAGDDLACIAPSPLPVSVVHKLQAILGRLIANDRLDRCVGIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSQIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLSKLRLDFNRLFGGAPCVEIQNLTRDLIKRVIDGAAEIFWELFVQVELQRPNPPPVDGNVPRLVSFITDYCNKLLGEDYKPILTQVLIIHRSWKRQSFQERVLVTEILNIVKAVEQNVETWIKAYDDPILSHFFAMNNHWHLCKHLKGTKLGELLGDSWLREHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYTKQSSWIMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDASSTKYAKYTVQKLEEMLLCLYRPRPVRHGSLRSPTFSAKYGNGVPDLRRTASAVV 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01677 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 71 632 IPR004140 GO:0000145|GO:0006887
Spst8g01677 670 Pfam Exo70 exocyst complex subunit 277 632 IPR046364 GO:0000145|GO:0005546|GO:0006887
Spst8g01677 670 Gene3D Exocyst complex component Exo70 76 643 - -
Spst8g01677 670 SUPERFAMILY Cullin repeat-like 78 636 IPR016159 -
Spst8g01677 670 FunFam Exocyst subunit Exo70 family protein 128 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01677 Spst-Chr8 19598241 19600253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01677 6 670 EXO70 exocyst subunit family AT4G31540 72.674 0.0 1026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01677 K07195 - gmx:100796139 1242.64