Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01661 ATGAAATTCTACGAACGCATTCCAATAGAGGAAGTGTTTGAGCAGCTGAAATGTTCAAGAGCAGGTCTAACATCAGACGAAGGGGCCAACCGGCTCCAAGTCTTTGGACCAAACAAATTGGAAGAGAAAAGAGAGAGCAAGTTTTTGAAATTCTTGGGCTTTATGTGGAACCCTTTGTCTTGGGTCATGGAAGCTGCTGCTATCATGGCCATTGCTTTGGCAAATGGAGGAGGAAGGCCACCAGATTGGCAAGATTTTGTGGGAATCATTGCTCTGCTAGTGATAAACTCCACAATCAGTTTTATTGAGGAAAACAATGCTGGCAATGCTGCTGCTGCTCTTATGGCTGGTTTAGCCCCCAAGACTAAGGTACTACGGGATGGCAGATGGAGTGAACAAGATGCTGCAATTTTAGTACCAGGAGACATAATCAGCATCAAGTTAGGAGATATCATTCCGGCTGATGCTCGTCTTCTTGAGGGTGATCCTTTGAGTGTTGATCAGTCTGCTTTGACTGGAGAATCTCTTCCCGTGACAAAGAATCCCTCAGATGAAGTATTTTCGGGATCAACGGTTAAGAAGGGAGAGATTGAAGCAGTTGTGATTGCTACTGGAGTGCACACCTTTTTTGGAAAAGCAGCACATCTGGTAGACAGCACCAACCAAGTTGGACACTTTCAGAAAGTGCTCACAGCAATTGGTAACTTCTGCATTTGCTCTATTGCTATTGGAATCATCATCGAGCTCATAGTCATGTACCCAATTCAAGGCCGCAAGTACAGGGATGGAATTGACAATCTGTTGGTGCTCTTGATTGGAGGAATCCCCATTGCCATGCCAACTGTGTTGTCTGTCACTATGGCTATTGGTTCTCACAGGCTTTCTCAGCAGGGTGCCATCACAAAAAGAATGACAGCTATTGAGGAAATGGCAGGGATGGATGTCCTATGCAGTGACAAAACTGGGACTCTAACTTTGAATAAGTTGAGTGTTGATAGAAACTTGATTGAGGTGTTTGCTAAGGGTGTTGAGAAAGAATATGTTATCCTTCTAGCAGCCAGGGCATCCAGGACTGAAAATCAAGATGCCATTGATGCTGCAATTGTTGGCATGCTTGCTGATCCAAAGGAGGCACGTAGTGGTATTAGGGAGGTACATTTCCTTCCATTCAATCCTGTGGACAAGAGGACTGCACTTACCTATATTGATTCTGATGGAAATTGGCATAGAGCTAGCAAAGGGGCTCCTGAGCAGATAATAACCCTTTGCAACTGCAAAGAGGATGTCAGAAAAAGGGTTCATGCAGTAATTGATAAGTTTGCTGAGCGTGGACTTAGGTCTTTAGGTGTTGCAAGACAGGAAGTACCTGAAAAAACAAAAGATGGTCCAGGTGGACCATGGCAATTTGTTGGTCTGCTACCATTGTTTGATCCTCCCAGGCATGATAGTGCTGAAACCATTAGAAGAGCTCTTAACCTTGGTGTGAATGTTAAGATGATTACTGGGGATCAGCTTGCCATTGGAAAGGAAACGGGCCGAAGGCTCGGAATGGGGACAAACATGTACCCTTCATCTGCATTGCTTGGCCAAGACAAGGATGCCTCTATTTCAGCTCTTCCAGTTGATGAGTTGATTGAGAAGGCTGATGGATTTGCAGGAGTATTTCCTGAGCACAAATATGAAATTGTTAAGAGGCTGCAAGAGAGGAAGCATATATGTGGAATGACAGGTGATGGTGTAAACGATGCCCCTGCATTAAAGAAAGCAGATATTGGAATTGCTGTTGCTGATGCCACAGATGCTGCTAGAAGTGCTTCTGATATTGTCCTCACTGAACCTGGCCTCAGTGTCATTATTAGTGCAGTGCTCACCAGCAGGGCAATTTTCCAGAGGATGAAGAACTATACTATCTATGCTGTGTCAATCACCATCCGTATTGTGTTTGGTTTCTTGTTTATTGCGTTGATCTGGAGGTTTGATTTCGCACCCTTCATGGTTTTGATTATTGCCATACTAAATGATGGTACCATCATGACTATATCAAAGGATAGAGTGAAACCATCTCCACTTCCTGATAGCTGGAAACTGAGGGAGATATTCGCTACTGGCGTTGTGCTAGGCAGCTACTTGGCACTAATGACAGTGATATTTTTCTGGGCAATGAAAGATACCAACTTCTTCTCGAACAAGTTTGGTGTGAGGTCGCTGAGAAATAGCCGTGAGGAAATGATGGCAGCTTTATACCTGCAAGTCAGTATAATAAGCCAGGCTCTAATCTTTGTCACAAGGTCCCGCAGTTGGTCTTTTGTTGAAAGACCAGGTCTTCTCCTACTAGGAGCTTTTCTGATTGCTCAGTTGGTGGCAACTTTTATAGCAGTATATGCCAACTGGGGCTTTGCAAGAATAAAGGGAATGGGATGGGGTTGGGCTGGTGTAATCTGGCTTTTCAGTGTGGTAACCTATATCCCTCTTGATTTTCTCAAATTTGCAATCCGCTATATTCTAAGTGGGAAGGCTTGGGACAATCTTTTGGAGAACAAGACTGCTTTCACCACAAAGAAAGACTATGGTAAAGAAGAGAGGGAAGCTCAATGGGCGGCTGCACAGAGGACACTTCACGGTCTTCAGCCACCAGAAACTTCCAACCTTTTCAACGACAAGAATAGCTACAGAGAGCTTTCAGAGATTGCAGAACAAGCCAAGAGACGAGCTGAAGTTGCAAGGCTTAGGGAGCTTCATACTCTAAAGGGACACGTTGAGTCAGTGGTGAAGCTGAAGGGGCTTGACATTGACACAATTCAGCAGCACTATACAGTTTAA 2820 0.444 MKFYERIPIEEVFEQLKCSRAGLTSDEGANRLQVFGPNKLEEKRESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLSVDQSALTGESLPVTKNPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGIIIELIVMYPIQGRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEKEYVILLAARASRTENQDAIDAAIVGMLADPKEARSGIREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQIITLCNCKEDVRKRVHAVIDKFAERGLRSLGVARQEVPEKTKDGPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDASISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLFIALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGSYLALMTVIFFWAMKDTNFFSNKFGVRSLRNSREEMMAALYLQVSIISQALIFVTRSRSWSFVERPGLLLLGAFLIAQLVATFIAVYANWGFARIKGMGWGWAGVIWLFSVVTYIPLDFLKFAIRYILSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01661 939 NCBIfam HAD-IC family P-type ATPase 89 334 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst8g01661 939 NCBIfam HAD-IC family P-type ATPase 551 666 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst8g01661 939 CDD P-type_ATPase_H 22 829 IPR006534 GO:0008553|GO:0016020|GO:0120029
Spst8g01661 939 Pfam haloacid dehalogenase-like hydrolase 313 590 - -
Spst8g01661 939 Gene3D - 120 204 - -
Spst8g01661 939 PRINTS H+-transporting ATPase (proton pump) signature 433 451 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst8g01661 939 PRINTS H+-transporting ATPase (proton pump) signature 607 632 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst8g01661 939 PRINTS H+-transporting ATPase (proton pump) signature 548 564 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst8g01661 939 PRINTS H+-transporting ATPase (proton pump) signature 748 769 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst8g01661 939 PRINTS H+-transporting ATPase (proton pump) signature 576 592 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst8g01661 939 FunFam Plasma membrane ATPase 329 476 - -
Spst8g01661 939 Pfam Cation transporter/ATPase, N-terminus 6 69 IPR004014 -
Spst8g01661 939 FunFam Plasma membrane ATPase 469 624 - -
Spst8g01661 939 SMART Cation_ATPase_N_a_2 3 75 IPR004014 -
Spst8g01661 939 Pfam E1-E2 ATPase 119 296 - -
Spst8g01661 939 Gene3D - 329 476 IPR023299 GO:0000166
Spst8g01661 939 SUPERFAMILY HAD-like 313 623 IPR036412 -
Spst8g01661 939 FunFam ATPase 4 plasma membrane-type 561 803 - -
Spst8g01661 939 SFLD C1.7: P-type atpase like 299 627 - -
Spst8g01661 939 Gene3D - 888 939 - -
Spst8g01661 939 SUPERFAMILY Calcium ATPase, transmembrane domain M 4 835 IPR023298 -
Spst8g01661 939 Gene3D - 314 613 IPR023214 -
Spst8g01661 939 PANTHER CALCIUM-TRANSPORTING ATPASE 7 871 - -
Spst8g01661 939 PRINTS P-type cation-transporting ATPase superfamily signature 599 611 - -
Spst8g01661 939 PRINTS P-type cation-transporting ATPase superfamily signature 493 503 - -
Spst8g01661 939 PRINTS P-type cation-transporting ATPase superfamily signature 576 595 - -
Spst8g01661 939 PRINTS P-type cation-transporting ATPase superfamily signature 167 181 - -
Spst8g01661 939 PRINTS P-type cation-transporting ATPase superfamily signature 471 482 - -
Spst8g01661 939 PRINTS P-type cation-transporting ATPase superfamily signature 317 331 - -
Spst8g01661 939 SFLD p-type atpase 299 627 IPR044492 -
Spst8g01661 939 SUPERFAMILY Calcium ATPase, transduction domain A 120 217 IPR008250 -
Spst8g01661 939 FunFam Plasma membrane ATPase 120 204 - -
Spst8g01661 939 NCBIfam plasma-membrane proton-efflux P-type ATPase 22 794 IPR006534 GO:0008553|GO:0016020|GO:0120029
Spst8g01661 939 ProSitePatterns E1-E2 ATPases phosphorylation site. 319 325 IPR018303 -
Spst8g01661 939 Coils Coil 890 910 - -
Spst8g01661 939 Gene3D - 82 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01661 Spst-Chr8 19377250 19382586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01661 5 939 Primary Pumps ATPases AT3G42640 84.064 0.0 1612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01661 K01535 - gmx:100791692 1739.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01661 8 19377250 19382586 Spst8g01661 8 19377250 19382586 ECH
Spst8g01661 8 19377250 19382586 Spst9g00874 9 7661181 7667632 PCT